RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	MGP_NZOHlLtJ_G0024656	Gene ID		Accession	-
Symbol	Rprd1a	Alias	-	Full Name	regulation of nuclear pre-mRNA domain containing 1A
Status	Confidence	Length	55005 bases	Strand	Minus strand
Position	18 : 22043426 - 22098430	RNA binding domain	CREPT , CID
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_NZOHlLtJ_P0049671	CREPT	PF16566	2.7e-58	1
MGP_NZOHlLtJ_P0049671	CID	PF04818	2.4e-38	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Rprd1a-201	MGP_NZOHlLtJ_T0049671	4317	312aa	MGP_NZOHlLtJ_P0049671"/note="transcript_id=MGP_NZOHlLtJ_T0049671

Gene Model

Click here to download MGP_NZOHlLtJ_G0024656's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_NZOHlLtJ_G0024656's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0024656

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0024656

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression