RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_NZOHlLtJ_G0024266	Gene ID		Accession	-
Symbol	Gm5093	Alias	-	Full Name	predicted gene 5093
Status	Confidence	Length	522 bases	Strand	Minus strand
Position	17 : 47054759 - 47055280	RNA binding domain	Ribosomal_L5 , Ribosomal_L5_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_NZOHlLtJ_P0048486	Ribosomal_L5	PF00281	1.6e-16	1
MGP_NZOHlLtJ_P0048486	Ribosomal_L5_C	PF00673	5.6e-18	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Gm5093-201	MGP_NZOHlLtJ_T0048486	522	174aa	MGP_NZOHlLtJ_P0048486"/note="transcript_id=MGP_NZOHlLtJ_T0048486

Gene Model

Click here to download MGP_NZOHlLtJ_G0024266's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_NZOHlLtJ_G0024266's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0024266

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0024266

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression