RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_NZOHlLtJ_G0022160	Gene ID		Accession	-
Symbol	Tars	Alias	-	Full Name	threonyl-tRNA synthetase
Status	Confidence	Length	17072 bases	Strand	Minus strand
Position	15 : 8510156 - 8527227	RNA binding domain	HGTP_anticodon , tRNA_SAD , tRNA-synt_2b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_NZOHlLtJ_P0041103	HGTP_anticodon	PF03129	2e-19	1
MGP_NZOHlLtJ_P0041103	tRNA_SAD	PF07973	1.5e-11	2
MGP_NZOHlLtJ_P0041103	tRNA-synt_2b	PF00587	5.8e-37	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Tars-201	MGP_NZOHlLtJ_T0041103	2636	722aa	MGP_NZOHlLtJ_P0041103"/note="transcript_id=MGP_NZOHlLtJ_T0041103

Gene Model

Click here to download MGP_NZOHlLtJ_G0022160's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_NZOHlLtJ_G0022160's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0022160

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0022160

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression