RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_NZOHlLtJ_G0020644	Gene ID		Accession	-
Symbol	Heatr1	Alias	-	Full Name	HEAT repeat containing 1
Status	Confidence	Length	47112 bases	Strand	Plus strand
Position	13 : 9078577 - 9125688	RNA binding domain	U3snoRNP10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_NZOHlLtJ_P0036754	U3snoRNP10	PF12397	1.3e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Heatr1-201	MGP_NZOHlLtJ_T0036754	6537	2143aa	MGP_NZOHlLtJ_P0036754"/note="transcript_id=MGP_NZOHlLtJ_T0036754

Gene Model

Click here to download MGP_NZOHlLtJ_G0020644's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_NZOHlLtJ_G0020644's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0020644

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0020644

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression