RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0035955 | Gene ID |
|
Accession |
- |
Symbol |
Tsr2 |
Alias |
- |
Full Name |
TSR2 20S rRNA accumulation |
Status |
Confidence |
Length |
9948 bases |
Strand |
Minus strand |
Position |
X : 165665593 - 165675540 |
RNA binding domain |
WGG |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0097217 |
WGG |
PF10273 |
1.4e-25 |
1 |
MGP_NODShiLtJ_P0097216 |
WGG |
PF10273 |
1.4e-25 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tsr2-001 |
MGP_NODShiLtJ_T0097216 |
3796 |
192aa |
MGP_NODShiLtJ_P0097216"/note="transcript_id=MGP_NODShiLtJ_T0097216 |
- |
MGP_NODShiLtJ_T0097217 |
3804 |
195aa |
MGP_NODShiLtJ_P0097217"/note="transcript_id=MGP_NODShiLtJ_T0097217 |
- |
MGP_NODShiLtJ_T0097218 |
1318 |
35aa |
MGP_NODShiLtJ_P0097218"/note="transcript_id=MGP_NODShiLtJ_T0097218 |
- |
MGP_NODShiLtJ_T0097219 |
909 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0035955 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0097764 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 98.9744 | 98.9744 | mus_caroli | MGP_CAROLIEiJ_P0093030 | 98.9744 | 98.9744 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0097759 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0097841 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0097313 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0097232 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0097274 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0098275 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0098644 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus | ENSMUSP00000026295 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0097905 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0097790 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0096274 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 95.8974 | 94.8718 | rattus_norvegicus | ENSRNOP00000078813 | 82.3789 | 81.4978 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0097455 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0097319 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 98.4615 | 97.9487 | mus_pahari | MGP_PahariEiJ_P0090640 | 98.4615 | 97.9487 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0097481 | 100 | 100 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 99.4872 | 98.9744 | mus_spicilegus | ENSMSIP00000012916 | 99.4872 | 98.9744 |
MGP_NODShiLtJ_G0035955 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0097217 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0096795 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |