Description

Ensembl ID MGP_NODShiLtJ_G0035955 Gene ID Accession -
Symbol Tsr2 Alias - Full Name TSR2 20S rRNA accumulation
Status Confidence Length 9948 bases Strand Minus strand
Position X : 165665593 - 165675540 RNA binding domain WGG
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0097217 WGG PF10273 1.4e-25 1
MGP_NODShiLtJ_P0097216 WGG PF10273 1.4e-25 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tsr2-001 MGP_NODShiLtJ_T0097216 3796 192aa MGP_NODShiLtJ_P0097216"/note="transcript_id=MGP_NODShiLtJ_T0097216
- MGP_NODShiLtJ_T0097217 3804 195aa MGP_NODShiLtJ_P0097217"/note="transcript_id=MGP_NODShiLtJ_T0097217
- MGP_NODShiLtJ_T0097218 1318 35aa MGP_NODShiLtJ_P0097218"/note="transcript_id=MGP_NODShiLtJ_T0097218
- MGP_NODShiLtJ_T0097219 909 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0035955

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0097764100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P009721798.974498.9744mus_caroliMGP_CAROLIEiJ_P009303098.974498.9744
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_balbcjMGP_BALBcJ_P0097759100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_ajMGP_AJ_P0097841100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_c3hhejMGP_C3HHeJ_P0097313100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_cbajMGP_CBAJ_P0097232100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_fvbnjMGP_FVBNJ_P0097274100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0098275100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0098644100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculusENSMUSP00000026295100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_casteijMGP_CASTEiJ_P0097905100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_akrjMGP_AKRJ_P0097790100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_wsbeijMGP_WSBEiJ_P0096274100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P009721795.897494.8718rattus_norvegicusENSRNOP0000007881382.378981.4978
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_dba2jMGP_DBA2J_P0097455100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_pwkphjMGP_PWKPhJ_P0097319100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P009721798.461597.9487mus_pahariMGP_PahariEiJ_P009064098.461597.9487
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_musculus_lpjMGP_LPJ_P0097481100100
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P009721799.487298.9744mus_spicilegusENSMSIP0000001291699.487298.9744
MGP_NODShiLtJ_G0035955mus_musculus_nodshiltjMGP_NODShiLtJ_P0097217100100mus_spretusMGP_SPRETEiJ_P0096795100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression