Description

Ensembl ID MGP_NODShiLtJ_G0034330 Gene ID Accession -
Symbol Srpr Alias - Full Name signal recognition particle receptor ('docking protein')
Status Confidence Length 39096 bases Strand Plus strand
Position 9 : 36851392 - 36890487 RNA binding domain SRP54 , SRP54_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0091234 SRP54 PF00448 3.3e-47 1
MGP_NODShiLtJ_P0091234 SRP54_N PF02881 4.6e-08 2
MGP_NODShiLtJ_P0091235 SRP54 PF00448 3.3e-47 1
MGP_NODShiLtJ_P0091235 SRP54_N PF02881 4.6e-08 2
MGP_NODShiLtJ_P0091237 SRP54 PF00448 1.4e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- MGP_NODShiLtJ_T0091221 759 No protein -
- MGP_NODShiLtJ_T0091234 3004 636aa MGP_NODShiLtJ_P0091234"/note="transcript_id=MGP_NODShiLtJ_T0091234
- MGP_NODShiLtJ_T0091235 1911 636aa MGP_NODShiLtJ_P0091235"/note="transcript_id=MGP_NODShiLtJ_T0091235
- MGP_NODShiLtJ_T0091236 478 No protein -
- MGP_NODShiLtJ_T0091237 630 153aa MGP_NODShiLtJ_P0091237"/note="transcript_id=MGP_NODShiLtJ_T0091237

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P003459629.761913.8889mus_musculus_nodshiltjMGP_NODShiLtJ_P009123423.584911.0063
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P003459729.761913.8889mus_musculus_nodshiltjMGP_NODShiLtJ_P009123423.584911.0063

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P0091234100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0091670100100
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.685599.2138mus_caroliMGP_CAROLIEiJ_P008719499.685599.2138
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P0091234100100mus_musculus_balbcjMGP_BALBcJ_P0091667100100
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123422.169821.5409mus_musculus_ajMGP_AJ_P009174292.156989.5425
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123484.276783.6478mus_musculus_c3hhejMGP_C3HHeJ_P009124491.938291.2521
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P0091234100100mus_musculus_cbajMGP_CBAJ_P0091175100100
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P0091234100100mus_musculus_fvbnjMGP_FVBNJ_P0091220100100
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123422.169821.5409mus_musculus_c57bl6njMGP_C57BL6NJ_P009219292.156989.5425
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.371199.2138mus_musculus_nzohlltjMGP_NZOHlLtJ_P009250899.371199.2138
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.842899.8428mus_musculusENSMUSP0000003454199.842899.8428
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.842899.6855mus_musculus_casteijMGP_CASTEiJ_P009183399.842899.6855
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P0091234100100mus_musculus_akrjMGP_AKRJ_P0091683100100
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.842899.8428mus_musculus_wsbeijMGP_WSBEiJ_P009027699.842899.8428
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123492.924592.4528rattus_norvegicusENSRNOP0000001517798.172897.6744
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123422.169821.5409mus_musculus_dba2jMGP_DBA2J_P009138792.156989.5425
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.528399.3711mus_musculus_pwkphjMGP_PWKPhJ_P009127397.836297.6816
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.528399.3711mus_pahariMGP_PahariEiJ_P002284699.528399.3711
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.371199.2138mus_musculus_lpjMGP_LPJ_P009140299.371199.2138
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.685599.3711mus_spicilegusENSMSIP0000001060199.685599.3711
MGP_NODShiLtJ_G0034330mus_musculus_nodshiltjMGP_NODShiLtJ_P009123499.685599.3711mus_spretusMGP_SPRETEiJ_P009075794.910294.6108

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression