| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_NODShiLtJ_G0034330 | Gene ID |
|
Accession |
- |
| Symbol |
Srpr |
Alias |
- |
Full Name |
signal recognition particle receptor ('docking protein') |
| Status |
Confidence |
Length |
39096 bases |
Strand |
Plus strand |
| Position |
9 : 36851392 - 36890487 |
RNA binding domain |
SRP54 , SRP54_N |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_NODShiLtJ_P0091234 |
SRP54 |
PF00448 |
3.3e-47 |
1 |
| MGP_NODShiLtJ_P0091234 |
SRP54_N |
PF02881 |
4.6e-08 |
2 |
| MGP_NODShiLtJ_P0091235 |
SRP54 |
PF00448 |
3.3e-47 |
1 |
| MGP_NODShiLtJ_P0091235 |
SRP54_N |
PF02881 |
4.6e-08 |
2 |
| MGP_NODShiLtJ_P0091237 |
SRP54 |
PF00448 |
1.4e-19 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
MGP_NODShiLtJ_T0091221 |
759 |
No protein |
- |
| - |
MGP_NODShiLtJ_T0091234 |
3004 |
636aa |
MGP_NODShiLtJ_P0091234"/note="transcript_id=MGP_NODShiLtJ_T0091234 |
| - |
MGP_NODShiLtJ_T0091235 |
1911 |
636aa |
MGP_NODShiLtJ_P0091235"/note="transcript_id=MGP_NODShiLtJ_T0091235 |
| - |
MGP_NODShiLtJ_T0091236 |
478 |
No protein |
- |
| - |
MGP_NODShiLtJ_T0091237 |
630 |
153aa |
MGP_NODShiLtJ_P0091237"/note="transcript_id=MGP_NODShiLtJ_T0091237 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 29.7619 | 13.8889 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 23.5849 | 11.0063 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034597 | 29.7619 | 13.8889 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 23.5849 | 11.0063 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0091670 | 100 | 100 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.6855 | 99.2138 | mus_caroli | MGP_CAROLIEiJ_P0087194 | 99.6855 | 99.2138 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0091667 | 100 | 100 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 22.1698 | 21.5409 | mus_musculus_aj | MGP_AJ_P0091742 | 92.1569 | 89.5425 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 84.2767 | 83.6478 | mus_musculus_c3hhej | MGP_C3HHeJ_P0091244 | 91.9382 | 91.2521 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0091175 | 100 | 100 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0091220 | 100 | 100 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 22.1698 | 21.5409 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0092192 | 92.1569 | 89.5425 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.3711 | 99.2138 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0092508 | 99.3711 | 99.2138 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.8428 | 99.8428 | mus_musculus | ENSMUSP00000034541 | 99.8428 | 99.8428 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.8428 | 99.6855 | mus_musculus_casteij | MGP_CASTEiJ_P0091833 | 99.8428 | 99.6855 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0091683 | 100 | 100 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.8428 | 99.8428 | mus_musculus_wsbeij | MGP_WSBEiJ_P0090276 | 99.8428 | 99.8428 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 92.9245 | 92.4528 | rattus_norvegicus | ENSRNOP00000015177 | 98.1728 | 97.6744 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 22.1698 | 21.5409 | mus_musculus_dba2j | MGP_DBA2J_P0091387 | 92.1569 | 89.5425 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.5283 | 99.3711 | mus_musculus_pwkphj | MGP_PWKPhJ_P0091273 | 97.8362 | 97.6816 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.5283 | 99.3711 | mus_pahari | MGP_PahariEiJ_P0022846 | 99.5283 | 99.3711 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.3711 | 99.2138 | mus_musculus_lpj | MGP_LPJ_P0091402 | 99.3711 | 99.2138 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.6855 | 99.3711 | mus_spicilegus | ENSMSIP00000010601 | 99.6855 | 99.3711 |
| MGP_NODShiLtJ_G0034330 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 99.6855 | 99.3711 | mus_spretus | MGP_SPRETEiJ_P0090757 | 94.9102 | 94.6108 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |