| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_NODShiLtJ_G0034258 | Gene ID |
|
Accession |
- |
| Symbol |
Smarca4 |
Alias |
- |
Full Name |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |
| Status |
Confidence |
Length |
100868 bases |
Strand |
Plus strand |
| Position |
9 : 21953597 - 22054464 |
RNA binding domain |
ResIII , BRK |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_NODShiLtJ_P0091026 |
ResIII |
PF04851 |
2.2e-09 |
1 |
| MGP_NODShiLtJ_P0091026 |
BRK |
PF07533 |
2.1e-17 |
2 |
| MGP_NODShiLtJ_P0091025 |
ResIII |
PF04851 |
3.1e-09 |
1 |
| MGP_NODShiLtJ_P0091025 |
BRK |
PF07533 |
2.7e-17 |
2 |
| MGP_NODShiLtJ_P0091023 |
ResIII |
PF04851 |
3.1e-09 |
1 |
| MGP_NODShiLtJ_P0091023 |
BRK |
PF07533 |
2.7e-17 |
2 |
| MGP_NODShiLtJ_P0091024 |
ResIII |
PF04851 |
3.1e-09 |
1 |
| MGP_NODShiLtJ_P0091024 |
BRK |
PF07533 |
2.7e-17 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Smarca4-001 |
MGP_NODShiLtJ_T0091023 |
6359 |
1614aa |
MGP_NODShiLtJ_P0091023"/note="transcript_id=MGP_NODShiLtJ_T0091023 |
| - |
MGP_NODShiLtJ_T0091024 |
6346 |
1614aa |
MGP_NODShiLtJ_P0091024"/note="transcript_id=MGP_NODShiLtJ_T0091024 |
| - |
MGP_NODShiLtJ_T0091025 |
5405 |
1613aa |
MGP_NODShiLtJ_P0091025"/note="transcript_id=MGP_NODShiLtJ_T0091025 |
| - |
MGP_NODShiLtJ_T0091026 |
3800 |
1266aa |
MGP_NODShiLtJ_P0091026"/note="transcript_id=MGP_NODShiLtJ_T0091026 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051086 | 85.2152 | 77.043 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 84.6344 | 76.518 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0084044 | 28.2978 | 18.1171 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 32.0322 | 20.5081 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0064302 | 22.1701 | 13.2284 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 41.0161 | 24.4734 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0079811 | 28.5863 | 16.1123 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 34.0768 | 19.2069 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0062348 | 40.8889 | 27.8889 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 22.8005 | 15.5514 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0066766 | 38.5542 | 23.0254 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 17.8439 | 10.6568 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0096557 | 29.3548 | 16.6129 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 22.5527 | 12.7633 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051365 | 31.1005 | 10.5263 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 4.02726 | 1.36307 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0093730 | 24.1473 | 14.0518 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 21.9331 | 12.7633 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0064387 | 35.4402 | 20.5418 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 19.4548 | 11.2763 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0089508 | 22.0286 | 13.2102 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 39.1574 | 23.482 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0037133 | 32.304 | 19.715 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 16.8525 | 10.285 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0024360 | 16.1888 | 8.78136 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 16.7906 | 9.10781 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0069216 | 28.5861 | 16.9057 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 34.5725 | 20.4461 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0038610 | 28.5618 | 15.8001 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 26.2082 | 14.4981 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0096618 | 19.5477 | 10.1777 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 29.9876 | 15.6134 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077501 | 37.2184 | 23.0167 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 23.544 | 14.5601 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0020234 | 30.989 | 17.1429 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 17.4721 | 9.66543 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0058687 | 21.6156 | 12.5415 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 36.3073 | 21.0657 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0029720 | 27.5912 | 16.1557 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 35.1301 | 20.57 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0089134 | 39.2593 | 24.8677 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 22.9864 | 14.5601 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0095509 | 40.6816 | 26.6241 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 23.6679 | 15.4895 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0059867 | 28.3151 | 17.6471 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 17.596 | 10.9665 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051306 | 23.9719 | 13.2576 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 27.4473 | 15.1797 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0056579 | 30.5324 | 17.8319 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 29.4919 | 17.2243 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0072953 | 15.4519 | 7.4344 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 6.56753 | 3.15985 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0086426 | 16.5342 | 9.53545 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 33.5192 | 19.3309 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0086430 | 17.2804 | 9.91602 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 33.1475 | 19.0211 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0021668 | 26.0992 | 14.4995 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 17.2862 | 9.60347 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0062440 | 29.4118 | 15.0132 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 20.7559 | 10.5948 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0091454 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0086986 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0091455 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0091529 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0091031 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0090959 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0091008 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091978 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0092295 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus | ENSMUSP00000096547 | 99.8145 | 99.8145 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0091613 | 99.8145 | 99.8145 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0091473 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0090063 | 99.8145 | 99.8145 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 99.938 | 99.8761 | rattus_norvegicus | ENSRNOP00000013166 | 97.9356 | 97.8749 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0091173 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0091054 | 99.8145 | 99.8145 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 99.5043 | 99.5043 | mus_pahari | MGP_PahariEiJ_P0022635 | 99.8756 | 99.8756 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0091188 | 100 | 100 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 99.938 | mus_spicilegus | ENSMSIP00000018395 | 100 | 99.938 |
| MGP_NODShiLtJ_G0034258 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091023 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0090543 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
