Description

Ensembl ID MGP_NODShiLtJ_G0033898 Gene ID Accession -
Symbol Nip7 Alias - Full Name NIP7, nucleolar pre-rRNA processing protein
Status Confidence Length 5133 bases Strand Plus strand
Position 8 : 120256586 - 120261718 RNA binding domain UPF0113 , UPF0113_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0089952 UPF0113 PF03657 1.8e-22 1
MGP_NODShiLtJ_P0089952 UPF0113_N PF17833 3.6e-33 2
MGP_NODShiLtJ_P0089951 UPF0113_N PF17833 1.9e-33 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Nip7-001 MGP_NODShiLtJ_T0089951 2888 133aa MGP_NODShiLtJ_P0089951"/note="transcript_id=MGP_NODShiLtJ_T0089951
- MGP_NODShiLtJ_T0089952 3029 180aa MGP_NODShiLtJ_P0089952"/note="transcript_id=MGP_NODShiLtJ_T0089952

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P008941435.416718.75mus_musculus_nodshiltjMGP_NODShiLtJ_P008995218.888910
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P006155244.303822.7848mus_musculus_nodshiltjMGP_NODShiLtJ_P008995219.444410
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P003673146.835422.7848mus_musculus_nodshiltjMGP_NODShiLtJ_P008995220.555610

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0090368100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_caroliMGP_CAROLIEiJ_P0085926100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_balbcjMGP_BALBcJ_P0090373100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_ajMGP_AJ_P0090448100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_c3hhejMGP_C3HHeJ_P0089950100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_cbajMGP_CBAJ_P0089881100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_fvbnjMGP_FVBNJ_P0089927100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0090896100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0091208100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculusENSMUSP00000034392100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_casteijMGP_CASTEiJ_P0090495100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_akrjMGP_AKRJ_P0090383100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_wsbeijMGP_WSBEiJ_P0088988100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P00899527066.6667rattus_norvegicusENSRNOP0000009676894.736890.2256
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P008995282.777878.3333rattus_norvegicusENSRNOP0000008261382.777878.3333
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_dba2jMGP_DBA2J_P0090088100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_pwkphjMGP_PWKPhJ_P0089926100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P008995210099.4444mus_pahariMGP_PahariEiJ_P005417810099.4444
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_musculus_lpjMGP_LPJ_P0090122100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_spicilegusENSMSIP00000005378100100
MGP_NODShiLtJ_G0033898mus_musculus_nodshiltjMGP_NODShiLtJ_P0089952100100mus_spretusMGP_SPRETEiJ_P0089426100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression