Description

Ensembl ID MGP_NODShiLtJ_G0031902 Gene ID Accession -
Symbol Gpatch1 Alias - Full Name G patch domain containing 1
Status Confidence Length 47306 bases Strand Minus strand
Position 7 : 36508568 - 36555873 RNA binding domain G-patch , DUF1604
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0082911 G-patch PF01585 9e-07 1
MGP_NODShiLtJ_P0082911 DUF1604 PF07713 1.3e-35 2
MGP_NODShiLtJ_P0082910 G-patch PF01585 9.6e-07 1
MGP_NODShiLtJ_P0082910 DUF1604 PF07713 1.4e-35 2
MGP_NODShiLtJ_P0082912 DUF1604 PF07713 3.3e-33 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Gpatch1-001 MGP_NODShiLtJ_T0082910 3065 930aa MGP_NODShiLtJ_P0082910"/note="transcript_id=MGP_NODShiLtJ_T0082910
- MGP_NODShiLtJ_T0082911 2991 883aa MGP_NODShiLtJ_P0082911"/note="transcript_id=MGP_NODShiLtJ_T0082911
- MGP_NODShiLtJ_T0082912 2584 98aa MGP_NODShiLtJ_P0082912"/note="transcript_id=MGP_NODShiLtJ_T0082912
- MGP_NODShiLtJ_T0082913 621 No protein -
- MGP_NODShiLtJ_T0082914 694 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0031902

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291099.892599.7849mus_musculus_129s1svimjMGP_129S1SvImJ_P008327399.892599.7849
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291091.397991.2903mus_caroliMGP_CAROLIEiJ_P007900598.152498.0369
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_balbcjMGP_BALBcJ_P0083302100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_ajMGP_AJ_P0083335100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291010099.8925mus_musculus_c3hhejMGP_C3HHeJ_P008288310099.8925
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291010099.8925mus_musculus_cbajMGP_CBAJ_P008283110099.8925
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291010099.8925mus_musculus_fvbnjMGP_FVBNJ_P008288610099.8925
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291010099.8925mus_musculus_c57bl6njMGP_C57BL6NJ_P008378410099.8925
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0084052100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291010099.8925mus_musculusENSMUSP0000007863210099.8925
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_casteijMGP_CASTEiJ_P0083405100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291010099.8925mus_musculus_akrjMGP_AKRJ_P008327710099.8925
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_wsbeijMGP_WSBEiJ_P0081941100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291097.311895.8064rattus_norvegicusENSRNOP0000001579197.311895.8064
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_dba2jMGP_DBA2J_P0083012100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_pwkphjMGP_PWKPhJ_P0082834100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291098.279697.6344mus_pahariMGP_PahariEiJ_P001587698.068797.4249
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P0082910100100mus_musculus_lpjMGP_LPJ_P0083024100100
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291089.892588.3871mus_spicilegusENSMSIP0000002863691.767390.2305
MGP_NODShiLtJ_G0031902mus_musculus_nodshiltjMGP_NODShiLtJ_P008291099.677499.6774mus_spretusMGP_SPRETEiJ_P008233399.463599.4635

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression