RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0031902 | Gene ID |
|
Accession |
- |
Symbol |
Gpatch1 |
Alias |
- |
Full Name |
G patch domain containing 1 |
Status |
Confidence |
Length |
47306 bases |
Strand |
Minus strand |
Position |
7 : 36508568 - 36555873 |
RNA binding domain |
G-patch , DUF1604 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0082911 |
G-patch |
PF01585 |
9e-07 |
1 |
MGP_NODShiLtJ_P0082911 |
DUF1604 |
PF07713 |
1.3e-35 |
2 |
MGP_NODShiLtJ_P0082910 |
G-patch |
PF01585 |
9.6e-07 |
1 |
MGP_NODShiLtJ_P0082910 |
DUF1604 |
PF07713 |
1.4e-35 |
2 |
MGP_NODShiLtJ_P0082912 |
DUF1604 |
PF07713 |
3.3e-33 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Gpatch1-001 |
MGP_NODShiLtJ_T0082910 |
3065 |
930aa |
MGP_NODShiLtJ_P0082910"/note="transcript_id=MGP_NODShiLtJ_T0082910 |
- |
MGP_NODShiLtJ_T0082911 |
2991 |
883aa |
MGP_NODShiLtJ_P0082911"/note="transcript_id=MGP_NODShiLtJ_T0082911 |
- |
MGP_NODShiLtJ_T0082912 |
2584 |
98aa |
MGP_NODShiLtJ_P0082912"/note="transcript_id=MGP_NODShiLtJ_T0082912 |
- |
MGP_NODShiLtJ_T0082913 |
621 |
No protein |
- |
- |
MGP_NODShiLtJ_T0082914 |
694 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0031902 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 99.8925 | 99.7849 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0083273 | 99.8925 | 99.7849 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 91.3979 | 91.2903 | mus_caroli | MGP_CAROLIEiJ_P0079005 | 98.1524 | 98.0369 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0083302 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0083335 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 99.8925 | mus_musculus_c3hhej | MGP_C3HHeJ_P0082883 | 100 | 99.8925 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 99.8925 | mus_musculus_cbaj | MGP_CBAJ_P0082831 | 100 | 99.8925 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 99.8925 | mus_musculus_fvbnj | MGP_FVBNJ_P0082886 | 100 | 99.8925 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 99.8925 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0083784 | 100 | 99.8925 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0084052 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 99.8925 | mus_musculus | ENSMUSP00000078632 | 100 | 99.8925 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0083405 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 99.8925 | mus_musculus_akrj | MGP_AKRJ_P0083277 | 100 | 99.8925 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0081941 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 97.3118 | 95.8064 | rattus_norvegicus | ENSRNOP00000015791 | 97.3118 | 95.8064 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0083012 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0082834 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 98.2796 | 97.6344 | mus_pahari | MGP_PahariEiJ_P0015876 | 98.0687 | 97.4249 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0083024 | 100 | 100 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 89.8925 | 88.3871 | mus_spicilegus | ENSMSIP00000028636 | 91.7673 | 90.2305 |
MGP_NODShiLtJ_G0031902 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0082910 | 99.6774 | 99.6774 | mus_spretus | MGP_SPRETEiJ_P0082333 | 99.4635 | 99.4635 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |