Description

Ensembl ID MGP_NODShiLtJ_G0031317 Gene ID Accession -
Symbol Caprin2 Alias - Full Name caprin family member 2
Status Confidence Length 60971 bases Strand Minus strand
Position 6 : 167743757 - 167804727 RNA binding domain Caprin-1_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0080746 Caprin-1_C PF12287 1.8e-127 1
MGP_NODShiLtJ_P0080744 Caprin-1_C PF12287 2.9e-127 1
MGP_NODShiLtJ_P0080745 Caprin-1_C PF12287 1.4e-66 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Caprin2-009 MGP_NODShiLtJ_T0080743 1163 No protein -
- MGP_NODShiLtJ_T0080744 3697 1031aa MGP_NODShiLtJ_P0080744"/note="transcript_id=MGP_NODShiLtJ_T0080744
- MGP_NODShiLtJ_T0080745 1035 171aa MGP_NODShiLtJ_P0080745"/note="transcript_id=MGP_NODShiLtJ_T0080745
- MGP_NODShiLtJ_T0080746 2952 812aa MGP_NODShiLtJ_P0080746"/note="transcript_id=MGP_NODShiLtJ_T0080746
- MGP_NODShiLtJ_T0080747 3294 No protein -
- MGP_NODShiLtJ_T0080748 554 No protein -
- MGP_NODShiLtJ_T0080749 925 No protein -
- MGP_NODShiLtJ_T0080750 739 131aa MGP_NODShiLtJ_P0080750"/note="transcript_id=MGP_NODShiLtJ_T0080750
- MGP_NODShiLtJ_T0080751 6284 No protein -
- MGP_NODShiLtJ_T0080752 598 No protein -
- MGP_NODShiLtJ_T0080753 740 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P005613454.455434.7949mus_musculus_nodshiltjMGP_NODShiLtJ_P008074437.342423.8603

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0081099100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P008074496.411395.9263mus_caroliMGP_CAROLIEiJ_P007695498.415897.9208
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_balbcjMGP_BALBcJ_P0081123100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_ajMGP_AJ_P0081182100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_c3hhejMGP_C3HHeJ_P0080740100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_cbajMGP_CBAJ_P0080684100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_fvbnjMGP_FVBNJ_P0080730100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0081600100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0081872100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculusENSMUSP00000107195100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P008074499.51599.321mus_musculus_casteijMGP_CASTEiJ_P008129799.51599.321
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_akrjMGP_AKRJ_P0081111100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_wsbeijMGP_WSBEiJ_P0079820100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P008074495.538393.4045rattus_norvegicusENSRNOP0000006495695.72493.586
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_dba2jMGP_DBA2J_P0080843100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P008074499.61299.418mus_musculus_pwkphjMGP_PWKPhJ_P008073699.61299.418
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P008074497.090295.5383mus_pahariMGP_PahariEiJ_P005329697.090295.5383
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P0080744100100mus_musculus_lpjMGP_LPJ_P0080874100100
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P008074499.224199.0301mus_spicilegusENSMSIP0000002897799.031998.8383
MGP_NODShiLtJ_G0031317mus_musculus_nodshiltjMGP_NODShiLtJ_P008074499.127199.0301mus_spretusMGP_SPRETEiJ_P008022499.223399.1262

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression