RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0031317 | Gene ID |
|
Accession |
- |
Symbol |
Caprin2 |
Alias |
- |
Full Name |
caprin family member 2 |
Status |
Confidence |
Length |
60971 bases |
Strand |
Minus strand |
Position |
6 : 167743757 - 167804727 |
RNA binding domain |
Caprin-1_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0080746 |
Caprin-1_C |
PF12287 |
1.8e-127 |
1 |
MGP_NODShiLtJ_P0080744 |
Caprin-1_C |
PF12287 |
2.9e-127 |
1 |
MGP_NODShiLtJ_P0080745 |
Caprin-1_C |
PF12287 |
1.4e-66 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Caprin2-009 |
MGP_NODShiLtJ_T0080743 |
1163 |
No protein |
- |
- |
MGP_NODShiLtJ_T0080744 |
3697 |
1031aa |
MGP_NODShiLtJ_P0080744"/note="transcript_id=MGP_NODShiLtJ_T0080744 |
- |
MGP_NODShiLtJ_T0080745 |
1035 |
171aa |
MGP_NODShiLtJ_P0080745"/note="transcript_id=MGP_NODShiLtJ_T0080745 |
- |
MGP_NODShiLtJ_T0080746 |
2952 |
812aa |
MGP_NODShiLtJ_P0080746"/note="transcript_id=MGP_NODShiLtJ_T0080746 |
- |
MGP_NODShiLtJ_T0080747 |
3294 |
No protein |
- |
- |
MGP_NODShiLtJ_T0080748 |
554 |
No protein |
- |
- |
MGP_NODShiLtJ_T0080749 |
925 |
No protein |
- |
- |
MGP_NODShiLtJ_T0080750 |
739 |
131aa |
MGP_NODShiLtJ_P0080750"/note="transcript_id=MGP_NODShiLtJ_T0080750 |
- |
MGP_NODShiLtJ_T0080751 |
6284 |
No protein |
- |
- |
MGP_NODShiLtJ_T0080752 |
598 |
No protein |
- |
- |
MGP_NODShiLtJ_T0080753 |
740 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0056134 | 54.4554 | 34.7949 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 37.3424 | 23.8603 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0081099 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 96.4113 | 95.9263 | mus_caroli | MGP_CAROLIEiJ_P0076954 | 98.4158 | 97.9208 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0081123 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0081182 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0080740 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0080684 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0080730 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0081600 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0081872 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus | ENSMUSP00000107195 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 99.515 | 99.321 | mus_musculus_casteij | MGP_CASTEiJ_P0081297 | 99.515 | 99.321 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0081111 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0079820 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 95.5383 | 93.4045 | rattus_norvegicus | ENSRNOP00000064956 | 95.724 | 93.586 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0080843 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 99.612 | 99.418 | mus_musculus_pwkphj | MGP_PWKPhJ_P0080736 | 99.612 | 99.418 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 97.0902 | 95.5383 | mus_pahari | MGP_PahariEiJ_P0053296 | 97.0902 | 95.5383 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0080874 | 100 | 100 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 99.2241 | 99.0301 | mus_spicilegus | ENSMSIP00000028977 | 99.0319 | 98.8383 |
MGP_NODShiLtJ_G0031317 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0080744 | 99.1271 | 99.0301 | mus_spretus | MGP_SPRETEiJ_P0080224 | 99.2233 | 99.1262 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |