Description

Ensembl ID MGP_NODShiLtJ_G0030652 Gene ID Accession -
Symbol Serbp1 Alias - Full Name serpine1 mRNA binding protein 1
Status Confidence Length 40140 bases Strand Plus strand
Position 6 : 75406108 - 75446247 RNA binding domain HABP4_PAI-RBP1 , IHABP4_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0077565 HABP4_PAI-RBP1 PF04774 4.3e-35 1
MGP_NODShiLtJ_P0077565 IHABP4_N PF16174 5.6e-45 2
MGP_NODShiLtJ_P0077564 HABP4_PAI-RBP1 PF04774 1.9e-34 1
MGP_NODShiLtJ_P0077564 IHABP4_N PF16174 8.3e-45 2
MGP_NODShiLtJ_P0077568 HABP4_PAI-RBP1 PF04774 9.5e-31 1
MGP_NODShiLtJ_P0077568 IHABP4_N PF16174 6.5e-45 2
MGP_NODShiLtJ_P0077570 HABP4_PAI-RBP1 PF04774 3.7e-30 1
MGP_NODShiLtJ_P0077570 IHABP4_N PF16174 7e-45 2
MGP_NODShiLtJ_P0077576 HABP4_PAI-RBP1 PF04774 1.6e-15 1
MGP_NODShiLtJ_P0077576 IHABP4_N PF16174 3e-16 2
MGP_NODShiLtJ_P0077567 HABP4_PAI-RBP1 PF04774 3.2e-13 1
MGP_NODShiLtJ_P0077567 IHABP4_N PF16174 4.8e-45 2
MGP_NODShiLtJ_P0077574 IHABP4_N PF16174 7.6e-44 1
MGP_NODShiLtJ_P0077573 IHABP4_N PF16174 2.4e-43 1
MGP_NODShiLtJ_P0077571 IHABP4_N PF16174 4.2e-43 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Serbp1-001 MGP_NODShiLtJ_T0077563 397 No protein -
- MGP_NODShiLtJ_T0077564 15070 407aa MGP_NODShiLtJ_P0077564"/note="transcript_id=MGP_NODShiLtJ_T0077564
- MGP_NODShiLtJ_T0077565 1672 401aa MGP_NODShiLtJ_P0077565"/note="transcript_id=MGP_NODShiLtJ_T0077565
- MGP_NODShiLtJ_T0077566 2359 No protein -
- MGP_NODShiLtJ_T0077567 1293 362aa MGP_NODShiLtJ_P0077567"/note="transcript_id=MGP_NODShiLtJ_T0077567
- MGP_NODShiLtJ_T0077568 1336 386aa MGP_NODShiLtJ_P0077568"/note="transcript_id=MGP_NODShiLtJ_T0077568
- MGP_NODShiLtJ_T0077569 1928 No protein -
- MGP_NODShiLtJ_T0077570 1622 392aa MGP_NODShiLtJ_P0077570"/note="transcript_id=MGP_NODShiLtJ_T0077570
- MGP_NODShiLtJ_T0077571 1166 147aa MGP_NODShiLtJ_P0077571"/note="transcript_id=MGP_NODShiLtJ_T0077571
- MGP_NODShiLtJ_T0077572 3163 No protein -
- MGP_NODShiLtJ_T0077573 600 155aa MGP_NODShiLtJ_P0077573"/note="transcript_id=MGP_NODShiLtJ_T0077573
- MGP_NODShiLtJ_T0077574 717 211aa MGP_NODShiLtJ_P0077574"/note="transcript_id=MGP_NODShiLtJ_T0077574
- MGP_NODShiLtJ_T0077575 836 No protein -
- MGP_NODShiLtJ_T0077576 558 185aa MGP_NODShiLtJ_P0077576"/note="transcript_id=MGP_NODShiLtJ_T0077576
- MGP_NODShiLtJ_T0077577 612 74aa MGP_NODShiLtJ_P0077577"/note="transcript_id=MGP_NODShiLtJ_T0077577
- MGP_NODShiLtJ_T0077578 665 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P003715056.204443.7956mus_musculus_nodshiltjMGP_NODShiLtJ_P007756456.756844.226

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0077916100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P007756499.754399.2629mus_caroliMGP_CAROLIEiJ_P007417799.754399.2629
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_balbcjMGP_BALBcJ_P0077939100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_ajMGP_AJ_P0077993100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_c3hhejMGP_C3HHeJ_P0079362100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_cbajMGP_CBAJ_P0077514100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_fvbnjMGP_FVBNJ_P0077567100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0078397100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0078646100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculusENSMUSP00000039110100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_casteijMGP_CASTEiJ_P0078136100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_akrjMGP_AKRJ_P0077908100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_wsbeijMGP_WSBEiJ_P0076670100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P007756496.560296.0688rattus_norvegicusENSRNOP0000008051792.907892.435
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_dba2jMGP_DBA2J_P0077675100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_pwkphjMGP_PWKPhJ_P0077556100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P007756498.280198.0344mus_pahariMGP_PahariEiJ_P005025499.750699.5012
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_musculus_lpjMGP_LPJ_P0077703100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_spicilegusENSMSIP00000027266100100
MGP_NODShiLtJ_G0030652mus_musculus_nodshiltjMGP_NODShiLtJ_P0077564100100mus_spretusMGP_SPRETEiJ_P0077065100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression