RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0030652 | Gene ID |
|
Accession |
- |
Symbol |
Serbp1 |
Alias |
- |
Full Name |
serpine1 mRNA binding protein 1 |
Status |
Confidence |
Length |
40140 bases |
Strand |
Plus strand |
Position |
6 : 75406108 - 75446247 |
RNA binding domain |
HABP4_PAI-RBP1 , IHABP4_N |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0077565 |
HABP4_PAI-RBP1 |
PF04774 |
4.3e-35 |
1 |
MGP_NODShiLtJ_P0077565 |
IHABP4_N |
PF16174 |
5.6e-45 |
2 |
MGP_NODShiLtJ_P0077564 |
HABP4_PAI-RBP1 |
PF04774 |
1.9e-34 |
1 |
MGP_NODShiLtJ_P0077564 |
IHABP4_N |
PF16174 |
8.3e-45 |
2 |
MGP_NODShiLtJ_P0077568 |
HABP4_PAI-RBP1 |
PF04774 |
9.5e-31 |
1 |
MGP_NODShiLtJ_P0077568 |
IHABP4_N |
PF16174 |
6.5e-45 |
2 |
MGP_NODShiLtJ_P0077570 |
HABP4_PAI-RBP1 |
PF04774 |
3.7e-30 |
1 |
MGP_NODShiLtJ_P0077570 |
IHABP4_N |
PF16174 |
7e-45 |
2 |
MGP_NODShiLtJ_P0077576 |
HABP4_PAI-RBP1 |
PF04774 |
1.6e-15 |
1 |
MGP_NODShiLtJ_P0077576 |
IHABP4_N |
PF16174 |
3e-16 |
2 |
MGP_NODShiLtJ_P0077567 |
HABP4_PAI-RBP1 |
PF04774 |
3.2e-13 |
1 |
MGP_NODShiLtJ_P0077567 |
IHABP4_N |
PF16174 |
4.8e-45 |
2 |
MGP_NODShiLtJ_P0077574 |
IHABP4_N |
PF16174 |
7.6e-44 |
1 |
MGP_NODShiLtJ_P0077573 |
IHABP4_N |
PF16174 |
2.4e-43 |
1 |
MGP_NODShiLtJ_P0077571 |
IHABP4_N |
PF16174 |
4.2e-43 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Serbp1-001 |
MGP_NODShiLtJ_T0077563 |
397 |
No protein |
- |
- |
MGP_NODShiLtJ_T0077564 |
15070 |
407aa |
MGP_NODShiLtJ_P0077564"/note="transcript_id=MGP_NODShiLtJ_T0077564 |
- |
MGP_NODShiLtJ_T0077565 |
1672 |
401aa |
MGP_NODShiLtJ_P0077565"/note="transcript_id=MGP_NODShiLtJ_T0077565 |
- |
MGP_NODShiLtJ_T0077566 |
2359 |
No protein |
- |
- |
MGP_NODShiLtJ_T0077567 |
1293 |
362aa |
MGP_NODShiLtJ_P0077567"/note="transcript_id=MGP_NODShiLtJ_T0077567 |
- |
MGP_NODShiLtJ_T0077568 |
1336 |
386aa |
MGP_NODShiLtJ_P0077568"/note="transcript_id=MGP_NODShiLtJ_T0077568 |
- |
MGP_NODShiLtJ_T0077569 |
1928 |
No protein |
- |
- |
MGP_NODShiLtJ_T0077570 |
1622 |
392aa |
MGP_NODShiLtJ_P0077570"/note="transcript_id=MGP_NODShiLtJ_T0077570 |
- |
MGP_NODShiLtJ_T0077571 |
1166 |
147aa |
MGP_NODShiLtJ_P0077571"/note="transcript_id=MGP_NODShiLtJ_T0077571 |
- |
MGP_NODShiLtJ_T0077572 |
3163 |
No protein |
- |
- |
MGP_NODShiLtJ_T0077573 |
600 |
155aa |
MGP_NODShiLtJ_P0077573"/note="transcript_id=MGP_NODShiLtJ_T0077573 |
- |
MGP_NODShiLtJ_T0077574 |
717 |
211aa |
MGP_NODShiLtJ_P0077574"/note="transcript_id=MGP_NODShiLtJ_T0077574 |
- |
MGP_NODShiLtJ_T0077575 |
836 |
No protein |
- |
- |
MGP_NODShiLtJ_T0077576 |
558 |
185aa |
MGP_NODShiLtJ_P0077576"/note="transcript_id=MGP_NODShiLtJ_T0077576 |
- |
MGP_NODShiLtJ_T0077577 |
612 |
74aa |
MGP_NODShiLtJ_P0077577"/note="transcript_id=MGP_NODShiLtJ_T0077577 |
- |
MGP_NODShiLtJ_T0077578 |
665 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0037150 | 56.2044 | 43.7956 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 56.7568 | 44.226 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0077916 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 99.7543 | 99.2629 | mus_caroli | MGP_CAROLIEiJ_P0074177 | 99.7543 | 99.2629 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0077939 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0077993 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0079362 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0077514 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0077567 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0078397 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0078646 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus | ENSMUSP00000039110 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0078136 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0077908 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0076670 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 96.5602 | 96.0688 | rattus_norvegicus | ENSRNOP00000080517 | 92.9078 | 92.435 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0077675 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0077556 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 98.2801 | 98.0344 | mus_pahari | MGP_PahariEiJ_P0050254 | 99.7506 | 99.5012 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0077703 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_spicilegus | ENSMSIP00000027266 | 100 | 100 |
MGP_NODShiLtJ_G0030652 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077564 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0077065 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |