Description

Ensembl ID MGP_NODShiLtJ_G0025426 Gene ID Accession -
Symbol Exosc2 Alias - Full Name exosome component 2
Status Confidence Length 15991 bases Strand Plus strand
Position 2 : 31834322 - 31850312 RNA binding domain ECR1_N , KH_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0053682 ECR1_N PF14382 5.6e-16 1
MGP_NODShiLtJ_P0053681 ECR1_N PF14382 4.2e-15 1
MGP_NODShiLtJ_P0053681 KH_6 PF15985 2e-12 2
MGP_NODShiLtJ_P0053679 ECR1_N PF14382 5.3e-15 1
MGP_NODShiLtJ_P0053679 KH_6 PF15985 2.6e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Exosc2-001 MGP_NODShiLtJ_T0053679 1595 293aa MGP_NODShiLtJ_P0053679"/note="transcript_id=MGP_NODShiLtJ_T0053679
- MGP_NODShiLtJ_T0053680 2076 No protein -
- MGP_NODShiLtJ_T0053681 747 247aa MGP_NODShiLtJ_P0053681"/note="transcript_id=MGP_NODShiLtJ_T0053681
- MGP_NODShiLtJ_T0053682 518 74aa MGP_NODShiLtJ_P0053682"/note="transcript_id=MGP_NODShiLtJ_T0053682
- MGP_NODShiLtJ_T0053683 566 No protein -
- MGP_NODShiLtJ_T0053684 496 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P006518531.386918.9781mus_musculus_nodshiltjMGP_NODShiLtJ_P005367929.351517.7474

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0053985100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_caroliMGP_CAROLIEiJ_P0050982100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_balbcjMGP_BALBcJ_P0053943100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_ajMGP_AJ_P0053999100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_c3hhejMGP_C3HHeJ_P0053675100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_cbajMGP_CBAJ_P0053621100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_fvbnjMGP_FVBNJ_P0053690100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0054430100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0054569100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculusENSMUSP00000043519100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_casteijMGP_CASTEiJ_P0053843100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_akrjMGP_AKRJ_P0053953100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_wsbeijMGP_WSBEiJ_P0052948100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P005367999.658797.2696rattus_norvegicusENSRNOP0000001231199.658797.2696
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_dba2jMGP_DBA2J_P0053729100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_pwkphjMGP_PWKPhJ_P0053447100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P005367910099.6587mus_pahariMGP_PahariEiJ_P006199410099.6587
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_musculus_lpjMGP_LPJ_P0053835100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_spicilegusENSMSIP00000023396100100
MGP_NODShiLtJ_G0025426mus_musculus_nodshiltjMGP_NODShiLtJ_P0053679100100mus_spretusMGP_SPRETEiJ_P0053020100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression