RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0025426 | Gene ID |
|
Accession |
- |
Symbol |
Exosc2 |
Alias |
- |
Full Name |
exosome component 2 |
Status |
Confidence |
Length |
15991 bases |
Strand |
Plus strand |
Position |
2 : 31834322 - 31850312 |
RNA binding domain |
ECR1_N , KH_6 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0053682 |
ECR1_N |
PF14382 |
5.6e-16 |
1 |
MGP_NODShiLtJ_P0053681 |
ECR1_N |
PF14382 |
4.2e-15 |
1 |
MGP_NODShiLtJ_P0053681 |
KH_6 |
PF15985 |
2e-12 |
2 |
MGP_NODShiLtJ_P0053679 |
ECR1_N |
PF14382 |
5.3e-15 |
1 |
MGP_NODShiLtJ_P0053679 |
KH_6 |
PF15985 |
2.6e-12 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Exosc2-001 |
MGP_NODShiLtJ_T0053679 |
1595 |
293aa |
MGP_NODShiLtJ_P0053679"/note="transcript_id=MGP_NODShiLtJ_T0053679 |
- |
MGP_NODShiLtJ_T0053680 |
2076 |
No protein |
- |
- |
MGP_NODShiLtJ_T0053681 |
747 |
247aa |
MGP_NODShiLtJ_P0053681"/note="transcript_id=MGP_NODShiLtJ_T0053681 |
- |
MGP_NODShiLtJ_T0053682 |
518 |
74aa |
MGP_NODShiLtJ_P0053682"/note="transcript_id=MGP_NODShiLtJ_T0053682 |
- |
MGP_NODShiLtJ_T0053683 |
566 |
No protein |
- |
- |
MGP_NODShiLtJ_T0053684 |
496 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0065185 | 31.3869 | 18.9781 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 29.3515 | 17.7474 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0053985 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0050982 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0053943 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0053999 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0053675 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0053621 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0053690 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0054430 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0054569 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus | ENSMUSP00000043519 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0053843 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0053953 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0052948 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 99.6587 | 97.2696 | rattus_norvegicus | ENSRNOP00000012311 | 99.6587 | 97.2696 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0053729 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053447 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 99.6587 | mus_pahari | MGP_PahariEiJ_P0061994 | 100 | 99.6587 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0053835 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_spicilegus | ENSMSIP00000023396 | 100 | 100 |
MGP_NODShiLtJ_G0025426 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053679 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0053020 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |