RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0024966 | Gene ID |
|
Accession |
- |
Symbol |
Exosc1 |
Alias |
- |
Full Name |
exosome component 1 |
Status |
Confidence |
Length |
11417 bases |
Strand |
Minus strand |
Position |
19 : 43989262 - 44000678 |
RNA binding domain |
ECR1_N , EXOSC1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0051460 |
ECR1_N |
PF14382 |
1.7e-09 |
1 |
MGP_NODShiLtJ_P0051459 |
ECR1_N |
PF14382 |
2.3e-09 |
1 |
MGP_NODShiLtJ_P0051459 |
EXOSC1 |
PF10447 |
1e-14 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Exosc1-201 |
MGP_NODShiLtJ_T0051459 |
1622 |
195aa |
MGP_NODShiLtJ_P0051459"/note="transcript_id=MGP_NODShiLtJ_T0051459 |
- |
MGP_NODShiLtJ_T0051460 |
1499 |
154aa |
MGP_NODShiLtJ_P0051460"/note="transcript_id=MGP_NODShiLtJ_T0051460 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0024966 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0051768 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 99.4872 | 99.4872 | mus_caroli | MGP_CAROLIEiJ_P0048789 | 99.4872 | 99.4872 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0051722 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0051777 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0051454 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0051400 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0051460 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0052217 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0052342 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus | ENSMUSP00000074756 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0051589 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0051726 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0050738 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 99.4872 | 98.9744 | rattus_norvegicus | ENSRNOP00000067627 | 99.4872 | 98.9744 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0051506 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0051195 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 99.4872 | 98.9744 | mus_pahari | MGP_PahariEiJ_P0021752 | 99.4872 | 98.9744 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0051627 | 100 | 100 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 99.4872 | 99.4872 | mus_spicilegus | ENSMSIP00000018449 | 99.4872 | 99.4872 |
MGP_NODShiLtJ_G0024966 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0051459 | 99.4872 | 99.4872 | mus_spretus | MGP_SPRETEiJ_P0050794 | 99.4872 | 99.4872 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |