Description

Ensembl ID MGP_NODShiLtJ_G0024120 Gene ID Accession -
Symbol Hars2 Alias - Full Name histidyl-tRNA synthetase 2
Status Confidence Length 10828 bases Strand Plus strand
Position 18 : 38725135 - 38735962 RNA binding domain tRNA-synt_His , HGTP_anticodon , HGTP_anticodon2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0049057 tRNA-synt_His PF13393 5.7e-38 1
MGP_NODShiLtJ_P0049057 HGTP_anticodon PF03129 5.8e-16 2
MGP_NODShiLtJ_P0049057 HGTP_anticodon2 PF12745 5.4e-08 3
MGP_NODShiLtJ_P0049058 tRNA-synt_His PF13393 4.4e-21 1
MGP_NODShiLtJ_P0049058 HGTP_anticodon PF03129 4.3e-16 2
MGP_NODShiLtJ_P0049058 HGTP_anticodon2 PF12745 4.2e-08 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Hars2-003 MGP_NODShiLtJ_T0049056 896 No protein -
- MGP_NODShiLtJ_T0049057 3336 505aa MGP_NODShiLtJ_P0049057"/note="transcript_id=MGP_NODShiLtJ_T0049057
- MGP_NODShiLtJ_T0049058 2002 424aa MGP_NODShiLtJ_P0049058"/note="transcript_id=MGP_NODShiLtJ_T0049058
- MGP_NODShiLtJ_T0049059 772 No protein -
- MGP_NODShiLtJ_T0049060 820 No protein -
- MGP_NODShiLtJ_T0049061 406 No protein -
- MGP_NODShiLtJ_T0049062 769 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905580.157267.78mus_musculus_nodshiltjMGP_NODShiLtJ_P004905780.792168.3168

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0049380100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905799.009998.2178mus_caroliMGP_CAROLIEiJ_P004642699.009998.2178
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_balbcjMGP_BALBcJ_P0049323100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_ajMGP_AJ_P0049362100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_c3hhejMGP_C3HHeJ_P0049058100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_cbajMGP_CBAJ_P0048985100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_fvbnjMGP_FVBNJ_P0049057100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0049808100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0049914100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculusENSMUSP00000117231100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905799.80299.604mus_musculus_casteijMGP_CASTEiJ_P004915699.80299.604
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_akrjMGP_AKRJ_P0049320100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_wsbeijMGP_WSBEiJ_P0048347100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905795.049591.6832rattus_norvegicusENSRNOP0000009009170.484667.9883
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_dba2jMGP_DBA2J_P0049082100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905710099.802mus_musculus_pwkphjMGP_PWKPhJ_P004875710099.802
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905798.811997.2277mus_pahariMGP_PahariEiJ_P003902498.811997.2277
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P0049057100100mus_musculus_lpjMGP_LPJ_P0049205100100
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905799.60499.0099mus_spicilegusENSMSIP0000003804099.60499.0099
MGP_NODShiLtJ_G0024120mus_musculus_nodshiltjMGP_NODShiLtJ_P004905799.60499.4059mus_spretusMGP_SPRETEiJ_P004834899.60499.4059

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression