Description

Ensembl ID MGP_NODShiLtJ_G0023904 Gene ID Accession -
Symbol Lrpprc Alias - Full Name leucine-rich PPR-motif containing
Status Confidence Length 85528 bases Strand Minus strand
Position 17 : 94835191 - 94920718 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0048394 PPR_3 PF13812 1.3e-24 1
MGP_NODShiLtJ_P0048394 PPR_3 PF13812 1.3e-24 2
MGP_NODShiLtJ_P0048394 PPR_long PF17177 5.3e-16 3
MGP_NODShiLtJ_P0048394 PPR PF01535 6.6e-23 4
MGP_NODShiLtJ_P0048394 PPR PF01535 6.6e-23 5
MGP_NODShiLtJ_P0048394 PPR PF01535 6.6e-23 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Lrpprc-001 MGP_NODShiLtJ_T0048394 4393 1392aa MGP_NODShiLtJ_P0048394"/note="transcript_id=MGP_NODShiLtJ_T0048394
- MGP_NODShiLtJ_T0048395 809 No protein -
- MGP_NODShiLtJ_T0048396 565 141aa MGP_NODShiLtJ_P0048396"/note="transcript_id=MGP_NODShiLtJ_T0048396
- MGP_NODShiLtJ_T0048397 513 No protein -
- MGP_NODShiLtJ_T0048398 2823 No protein -
- MGP_NODShiLtJ_T0048399 4010 No protein -
- MGP_NODShiLtJ_T0048400 967 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0023904

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_129s1svimjMGP_129S1SvImJ_P004871199.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839497.916795.6178mus_caroliMGP_CAROLIEiJ_P004575597.916795.6178
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_balbcjMGP_BALBcJ_P004865199.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_ajMGP_AJ_P004869099.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_c3hhejMGP_C3HHeJ_P004839899.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_cbajMGP_CBAJ_P004832499.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P0048394100100mus_musculus_fvbnjMGP_FVBNJ_P0048391100100
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_c57bl6njMGP_C57BL6NJ_P004914499.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839410099.9282mus_musculus_nzohlltjMGP_NZOHlLtJ_P004924110099.9282
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculusENSMUSP0000010792799.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.712699.569mus_musculus_casteijMGP_CASTEiJ_P004847399.712699.569
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_akrjMGP_AKRJ_P004865299.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_wsbeijMGP_WSBEiJ_P004769899.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839495.186890.3736rattus_norvegicusENSRNOP0000000820094.778389.9857
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_dba2jMGP_DBA2J_P004842699.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.784599.7126mus_musculus_pwkphjMGP_PWKPhJ_P004807099.784599.7126
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839496.551793.4626mus_pahariMGP_PahariEiJ_P004526996.551793.4626
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845mus_musculus_lpjMGP_LPJ_P004853999.856399.7845
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839498.850698.204mus_spicilegusENSMSIP0000001302399.135498.487
MGP_NODShiLtJ_G0023904mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.353498.5632mus_spretusMGP_SPRETEiJ_P004767699.353498.5632

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression