RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0023904 | Gene ID |
|
Accession |
- |
Symbol |
Lrpprc |
Alias |
- |
Full Name |
leucine-rich PPR-motif containing |
Status |
Confidence |
Length |
85528 bases |
Strand |
Minus strand |
Position |
17 : 94835191 - 94920718 |
RNA binding domain |
PPR_3 , PPR_long , PPR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0048394 |
PPR_3 |
PF13812 |
1.3e-24 |
1 |
MGP_NODShiLtJ_P0048394 |
PPR_3 |
PF13812 |
1.3e-24 |
2 |
MGP_NODShiLtJ_P0048394 |
PPR_long |
PF17177 |
5.3e-16 |
3 |
MGP_NODShiLtJ_P0048394 |
PPR |
PF01535 |
6.6e-23 |
4 |
MGP_NODShiLtJ_P0048394 |
PPR |
PF01535 |
6.6e-23 |
5 |
MGP_NODShiLtJ_P0048394 |
PPR |
PF01535 |
6.6e-23 |
6 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Lrpprc-001 |
MGP_NODShiLtJ_T0048394 |
4393 |
1392aa |
MGP_NODShiLtJ_P0048394"/note="transcript_id=MGP_NODShiLtJ_T0048394 |
- |
MGP_NODShiLtJ_T0048395 |
809 |
No protein |
- |
- |
MGP_NODShiLtJ_T0048396 |
565 |
141aa |
MGP_NODShiLtJ_P0048396"/note="transcript_id=MGP_NODShiLtJ_T0048396 |
- |
MGP_NODShiLtJ_T0048397 |
513 |
No protein |
- |
- |
MGP_NODShiLtJ_T0048398 |
2823 |
No protein |
- |
- |
MGP_NODShiLtJ_T0048399 |
4010 |
No protein |
- |
- |
MGP_NODShiLtJ_T0048400 |
967 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0023904 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0048711 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 97.9167 | 95.6178 | mus_caroli | MGP_CAROLIEiJ_P0045755 | 97.9167 | 95.6178 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_balbcj | MGP_BALBcJ_P0048651 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_aj | MGP_AJ_P0048690 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_c3hhej | MGP_C3HHeJ_P0048398 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_cbaj | MGP_CBAJ_P0048324 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0048391 | 100 | 100 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0049144 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 100 | 99.9282 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0049241 | 100 | 99.9282 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus | ENSMUSP00000107927 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.7126 | 99.569 | mus_musculus_casteij | MGP_CASTEiJ_P0048473 | 99.7126 | 99.569 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_akrj | MGP_AKRJ_P0048652 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_wsbeij | MGP_WSBEiJ_P0047698 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 95.1868 | 90.3736 | rattus_norvegicus | ENSRNOP00000008200 | 94.7783 | 89.9857 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_dba2j | MGP_DBA2J_P0048426 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.7845 | 99.7126 | mus_musculus_pwkphj | MGP_PWKPhJ_P0048070 | 99.7845 | 99.7126 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 96.5517 | 93.4626 | mus_pahari | MGP_PahariEiJ_P0045269 | 96.5517 | 93.4626 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.8563 | 99.7845 | mus_musculus_lpj | MGP_LPJ_P0048539 | 99.8563 | 99.7845 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 98.8506 | 98.204 | mus_spicilegus | ENSMSIP00000013023 | 99.1354 | 98.487 |
MGP_NODShiLtJ_G0023904 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048394 | 99.3534 | 98.5632 | mus_spretus | MGP_SPRETEiJ_P0047676 | 99.3534 | 98.5632 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |