RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0023770 | Gene ID |
|
Accession |
- |
Symbol |
Khsrp |
Alias |
- |
Full Name |
KH-type splicing regulatory protein |
Status |
Confidence |
Length |
15166 bases |
Strand |
Minus strand |
Position |
17 : 62876323 - 62891488 |
RNA binding domain |
KH_2 , DUF1897 , KH_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0048020 |
KH_2 |
PF07650 |
1.9e-18 |
1 |
MGP_NODShiLtJ_P0048020 |
DUF1897 |
PF09005 |
2.1e-12 |
2 |
MGP_NODShiLtJ_P0048020 |
DUF1897 |
PF09005 |
2.1e-12 |
3 |
MGP_NODShiLtJ_P0048020 |
KH_1 |
PF00013 |
1.4e-64 |
4 |
MGP_NODShiLtJ_P0048020 |
KH_1 |
PF00013 |
1.4e-64 |
5 |
MGP_NODShiLtJ_P0048020 |
KH_1 |
PF00013 |
1.4e-64 |
6 |
MGP_NODShiLtJ_P0048020 |
KH_1 |
PF00013 |
1.4e-64 |
7 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Khsrp-201 |
MGP_NODShiLtJ_T0048020 |
4006 |
748aa |
MGP_NODShiLtJ_P0048020"/note="transcript_id=MGP_NODShiLtJ_T0048020 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0078228 | 40.4494 | 23.3146 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 19.2513 | 11.0963 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034542 | 31.3609 | 16.1736 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 21.2567 | 10.9626 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0025651 | 39.6226 | 22.6415 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 19.6524 | 11.2299 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077112 | 30.2245 | 16.2349 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 23.3957 | 12.5668 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0093682 | 38.7097 | 22.8288 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 20.8556 | 12.2995 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0084479 | 36.6255 | 18.93 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 11.8984 | 6.14973 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0037005 | 34.4371 | 18.7638 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 20.8556 | 11.3636 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053671 | 67.1304 | 53.0435 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 51.6043 | 40.7754 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0081528 | 30.0813 | 15.6504 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 19.7861 | 10.2941 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0081527 | 30.0395 | 16.0079 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 20.3209 | 10.8289 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0043531 | 30.4054 | 15.8784 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 24.0642 | 12.5668 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0063992 | 75.5352 | 66.5138 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 66.0428 | 58.1551 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0031626 | 29.8094 | 14.9047 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 22.9947 | 11.4973 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0042481 | 39.2265 | 22.0994 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 18.984 | 10.6952 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0048332 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 90.9091 | 90.3743 | mus_caroli | MGP_CAROLIEiJ_P0045394 | 93.7931 | 93.2414 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0048277 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0048315 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0048021 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0047947 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0048014 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0048766 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0048862 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus | ENSMUSP00000007814 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0048081 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0048275 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0047325 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 99.8663 | rattus_norvegicus | ENSRNOP00000072174 | 100 | 99.8663 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0048047 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 95.0535 | 94.385 | mus_musculus_pwkphj | MGP_PWKPhJ_P0047668 | 88.4328 | 87.8109 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 99.8663 | mus_pahari | MGP_PahariEiJ_P0044900 | 100 | 99.8663 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 98.9305 | 98.9305 | mus_musculus_lpj | MGP_LPJ_P0048158 | 77.9768 | 77.9768 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_spicilegus | ENSMSIP00000025958 | 100 | 100 |
MGP_NODShiLtJ_G0023770 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048020 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0047286 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |