Description

Ensembl ID MGP_NODShiLtJ_G0023770 Gene ID Accession -
Symbol Khsrp Alias - Full Name KH-type splicing regulatory protein
Status Confidence Length 15166 bases Strand Minus strand
Position 17 : 62876323 - 62891488 RNA binding domain KH_2 , DUF1897 , KH_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0048020 KH_2 PF07650 1.9e-18 1
MGP_NODShiLtJ_P0048020 DUF1897 PF09005 2.1e-12 2
MGP_NODShiLtJ_P0048020 DUF1897 PF09005 2.1e-12 3
MGP_NODShiLtJ_P0048020 KH_1 PF00013 1.4e-64 4
MGP_NODShiLtJ_P0048020 KH_1 PF00013 1.4e-64 5
MGP_NODShiLtJ_P0048020 KH_1 PF00013 1.4e-64 6
MGP_NODShiLtJ_P0048020 KH_1 PF00013 1.4e-64 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Khsrp-201 MGP_NODShiLtJ_T0048020 4006 748aa MGP_NODShiLtJ_P0048020"/note="transcript_id=MGP_NODShiLtJ_T0048020

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P007822840.449423.3146mus_musculus_nodshiltjMGP_NODShiLtJ_P004802019.251311.0963
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P003454231.360916.1736mus_musculus_nodshiltjMGP_NODShiLtJ_P004802021.256710.9626
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P002565139.622622.6415mus_musculus_nodshiltjMGP_NODShiLtJ_P004802019.652411.2299
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P007711230.224516.2349mus_musculus_nodshiltjMGP_NODShiLtJ_P004802023.395712.5668
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P009368238.709722.8288mus_musculus_nodshiltjMGP_NODShiLtJ_P004802020.855612.2995
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P008447936.625518.93mus_musculus_nodshiltjMGP_NODShiLtJ_P004802011.89846.14973
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P003700534.437118.7638mus_musculus_nodshiltjMGP_NODShiLtJ_P004802020.855611.3636
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P005367167.130453.0435mus_musculus_nodshiltjMGP_NODShiLtJ_P004802051.604340.7754
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P008152830.081315.6504mus_musculus_nodshiltjMGP_NODShiLtJ_P004802019.786110.2941
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P008152730.039516.0079mus_musculus_nodshiltjMGP_NODShiLtJ_P004802020.320910.8289
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P004353130.405415.8784mus_musculus_nodshiltjMGP_NODShiLtJ_P004802024.064212.5668
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P006399275.535266.5138mus_musculus_nodshiltjMGP_NODShiLtJ_P004802066.042858.1551
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P003162629.809414.9047mus_musculus_nodshiltjMGP_NODShiLtJ_P004802022.994711.4973
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P004248139.226522.0994mus_musculus_nodshiltjMGP_NODShiLtJ_P004802018.98410.6952

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0048332100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P004802090.909190.3743mus_caroliMGP_CAROLIEiJ_P004539493.793193.2414
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_balbcjMGP_BALBcJ_P0048277100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_ajMGP_AJ_P0048315100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_c3hhejMGP_C3HHeJ_P0048021100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_cbajMGP_CBAJ_P0047947100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_fvbnjMGP_FVBNJ_P0048014100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0048766100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0048862100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculusENSMUSP00000007814100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_casteijMGP_CASTEiJ_P0048081100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_akrjMGP_AKRJ_P0048275100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_wsbeijMGP_WSBEiJ_P0047325100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P004802010099.8663rattus_norvegicusENSRNOP0000007217410099.8663
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_musculus_dba2jMGP_DBA2J_P0048047100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P004802095.053594.385mus_musculus_pwkphjMGP_PWKPhJ_P004766888.432887.8109
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P004802010099.8663mus_pahariMGP_PahariEiJ_P004490010099.8663
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P004802098.930598.9305mus_musculus_lpjMGP_LPJ_P004815877.976877.9768
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_spicilegusENSMSIP00000025958100100
MGP_NODShiLtJ_G0023770mus_musculus_nodshiltjMGP_NODShiLtJ_P0048020100100mus_spretusMGP_SPRETEiJ_P0047286100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression