RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0023469 | Gene ID |
|
Accession |
- |
Symbol |
Vars2 |
Alias |
- |
Full Name |
valyl-tRNA synthetase 2, mitochondrial |
Status |
Confidence |
Length |
11435 bases |
Strand |
Minus strand |
Position |
17 : 37653801 - 37665235 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0047115 |
tRNA-synt_1g |
PF09334 |
6.5e-15 |
1 |
MGP_NODShiLtJ_P0047115 |
tRNA-synt_1 |
PF00133 |
1e-180 |
2 |
MGP_NODShiLtJ_P0047115 |
Anticodon_1 |
PF08264 |
2e-30 |
3 |
MGP_NODShiLtJ_P0047122 |
tRNA-synt_1g |
PF09334 |
8.2e-05 |
1 |
MGP_NODShiLtJ_P0047122 |
tRNA-synt_1 |
PF00133 |
1e-27 |
2 |
MGP_NODShiLtJ_P0047118 |
tRNA-synt_1g |
PF09334 |
0.00039 |
1 |
MGP_NODShiLtJ_P0047118 |
tRNA-synt_1 |
PF00133 |
1.5e-47 |
2 |
MGP_NODShiLtJ_P0047117 |
tRNA-synt_1 |
PF00133 |
6.2e-104 |
1 |
MGP_NODShiLtJ_P0047117 |
Anticodon_1 |
PF08264 |
1e-24 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Vars2-001 |
MGP_NODShiLtJ_T0047115 |
4422 |
1060aa |
MGP_NODShiLtJ_P0047115"/note="transcript_id=MGP_NODShiLtJ_T0047115 |
- |
MGP_NODShiLtJ_T0047116 |
3800 |
No protein |
- |
- |
MGP_NODShiLtJ_T0047117 |
2507 |
580aa |
MGP_NODShiLtJ_P0047117"/note="transcript_id=MGP_NODShiLtJ_T0047117 |
- |
MGP_NODShiLtJ_T0047118 |
1972 |
214aa |
MGP_NODShiLtJ_P0047118"/note="transcript_id=MGP_NODShiLtJ_T0047118 |
- |
MGP_NODShiLtJ_T0047119 |
722 |
No protein |
- |
- |
MGP_NODShiLtJ_T0047120 |
603 |
No protein |
- |
- |
MGP_NODShiLtJ_T0047121 |
319 |
No protein |
- |
- |
MGP_NODShiLtJ_T0047122 |
832 |
112aa |
MGP_NODShiLtJ_P0047122"/note="transcript_id=MGP_NODShiLtJ_T0047122 |
- |
MGP_NODShiLtJ_T0047123 |
708 |
No protein |
- |
- |
MGP_NODShiLtJ_T0047124 |
618 |
No protein |
- |
- |
MGP_NODShiLtJ_T0047125 |
786 |
No protein |
- |
- |
MGP_NODShiLtJ_T0047126 |
718 |
75aa |
MGP_NODShiLtJ_P0047126"/note="transcript_id=MGP_NODShiLtJ_T0047126 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0046957 | 53.8222 | 42.1217 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 65.0943 | 50.9434 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0019695 | 33.2765 | 19.4539 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 18.3962 | 10.7547 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0027128 | 28.022 | 15.2747 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 24.0566 | 13.1132 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0049248 | 27.8438 | 14.1766 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 30.9434 | 15.7547 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0023875 | 36.2648 | 21.7391 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 34.6226 | 20.7547 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0036702 | 29.1601 | 16.878 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 34.717 | 20.0943 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0094888 | 30.9313 | 18.6253 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 26.3208 | 15.8491 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 100 | 99.9057 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0047441 | 100 | 99.9057 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.2453 | 98.5849 | mus_caroli | MGP_CAROLIEiJ_P0044527 | 99.2453 | 98.5849 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.5283 | 99.2453 | mus_musculus_balbcj | MGP_BALBcJ_P0047378 | 99.5283 | 99.2453 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.5283 | 99.2453 | mus_musculus_aj | MGP_AJ_P0047422 | 99.5283 | 99.2453 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0047117 | 100 | 100 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0047053 | 100 | 100 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0047116 | 100 | 100 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.717 | 99.5283 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0047862 | 99.717 | 99.5283 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 100 | 99.9057 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0047954 | 100 | 99.9057 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.717 | 99.5283 | mus_musculus | ENSMUSP00000047917 | 99.717 | 99.5283 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.8113 | 99.6226 | mus_musculus_casteij | MGP_CASTEiJ_P0047186 | 99.8113 | 99.6226 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0047376 | 100 | 100 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.8113 | 99.717 | mus_musculus_wsbeij | MGP_WSBEiJ_P0046450 | 99.8113 | 99.717 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.5283 | 99.2453 | mus_musculus_dba2j | MGP_DBA2J_P0047154 | 99.5283 | 99.2453 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.6226 | 99.434 | mus_musculus_pwkphj | MGP_PWKPhJ_P0046779 | 99.6226 | 99.434 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 98.4906 | 97.3585 | mus_pahari | MGP_PahariEiJ_P0044064 | 98.4906 | 97.3585 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 100 | 99.9057 | mus_musculus_lpj | MGP_LPJ_P0047262 | 100 | 99.9057 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.0566 | 98.7736 | mus_spicilegus | ENSMSIP00000017289 | 99.0566 | 98.7736 |
MGP_NODShiLtJ_G0023469 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0047115 | 99.2453 | 98.7736 | mus_spretus | MGP_SPRETEiJ_P0046431 | 99.2453 | 98.7736 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |