Description

Ensembl ID MGP_NODShiLtJ_G0019597 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 144941 bases Strand Plus strand
Position 12 : 59226922 - 59371862 RNA binding domain SRP54 , SRP54_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NODShiLtJ_P0034596 SRP54 PF00448 3.9e-78 1
MGP_NODShiLtJ_P0034596 SRP54_N PF02881 5.5e-20 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- MGP_NODShiLtJ_T0034596 2349 504aa MGP_NODShiLtJ_P0034596"/note="transcript_id=MGP_NODShiLtJ_T0034596

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P0034597100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0034596100100
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P009123423.584911.0063mus_musculus_nodshiltjMGP_NODShiLtJ_P003459629.761913.8889

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459688.293687.3016mus_musculus_129s1svimjMGP_129S1SvImJ_P003483896.949995.8606
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.2064mus_caroliMGP_CAROLIEiJ_P003228199.603299.2064
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.801699.6032mus_musculus_balbcjMGP_BALBcJ_P003476099.801699.6032
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.801699.6032mus_musculus_c3hhejMGP_C3HHeJ_P003454099.801699.6032
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.801699.6032mus_musculus_c3hhejMGP_C3HHeJ_P003453999.801699.6032
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.2064mus_musculus_cbajMGP_CBAJ_P003445299.603299.2064
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459671.825470.4365mus_musculus_fvbnjMGP_FVBNJ_P003458596.276694.4149
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459688.492187.3016mus_musculus_fvbnjMGP_FVBNJ_P003458499.111197.7778
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459672.222270.8333mus_musculus_c57bl6njMGP_C57BL6NJ_P003526195.28893.4555
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459672.222270.8333mus_musculus_c57bl6njMGP_C57BL6NJ_P003525895.28893.4555
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.2064mus_musculus_nzohlltjMGP_NZOHlLtJ_P003530399.603299.2064
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P0034596100100mus_musculusENSMUSP00000151681100100
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.2064mus_musculus_casteijMGP_CASTEiJ_P003446499.603299.2064
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459667.261962.6984mus_musculus_akrjMGP_AKRJ_P003474682.682977.0732
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459691.269889.881mus_musculus_wsbeijMGP_WSBEiJ_P003400398.290696.7949
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.0079rattus_norvegicusENSRNOP0000004894599.603299.0079
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459688.690588.6905mus_musculus_dba2jMGP_DBA2J_P0034598100100
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459688.690588.6905mus_musculus_dba2jMGP_DBA2J_P0034596100100
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.2064mus_musculus_pwkphjMGP_PWKPhJ_P003414599.603299.2064
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.2064mus_pahariMGP_PahariEiJ_P008239599.603299.2064
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459687.698487.5mus_musculus_lpjMGP_LPJ_P003473995.878595.6616
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459687.698487.5mus_musculus_lpjMGP_LPJ_P003473695.878595.6616
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459699.603299.0079mus_spicilegusENSMSIP0000001614390.450489.9099
MGP_NODShiLtJ_G0019597mus_musculus_nodshiltjMGP_NODShiLtJ_P003459665.079464.6825mus_spretusMGP_SPRETEiJ_P003377198.203697.6048

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression