RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NODShiLtJ_G0019597 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
144941 bases |
Strand |
Plus strand |
Position |
12 : 59226922 - 59371862 |
RNA binding domain |
SRP54 , SRP54_N |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NODShiLtJ_P0034596 |
SRP54 |
PF00448 |
3.9e-78 |
1 |
MGP_NODShiLtJ_P0034596 |
SRP54_N |
PF02881 |
5.5e-20 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
MGP_NODShiLtJ_T0034596 |
2349 |
504aa |
MGP_NODShiLtJ_P0034596"/note="transcript_id=MGP_NODShiLtJ_T0034596 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034597 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 100 | 100 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091234 | 23.5849 | 11.0063 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 29.7619 | 13.8889 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 88.2936 | 87.3016 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0034838 | 96.9499 | 95.8606 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.2064 | mus_caroli | MGP_CAROLIEiJ_P0032281 | 99.6032 | 99.2064 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.8016 | 99.6032 | mus_musculus_balbcj | MGP_BALBcJ_P0034760 | 99.8016 | 99.6032 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.8016 | 99.6032 | mus_musculus_c3hhej | MGP_C3HHeJ_P0034540 | 99.8016 | 99.6032 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.8016 | 99.6032 | mus_musculus_c3hhej | MGP_C3HHeJ_P0034539 | 99.8016 | 99.6032 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.2064 | mus_musculus_cbaj | MGP_CBAJ_P0034452 | 99.6032 | 99.2064 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 71.8254 | 70.4365 | mus_musculus_fvbnj | MGP_FVBNJ_P0034585 | 96.2766 | 94.4149 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 88.4921 | 87.3016 | mus_musculus_fvbnj | MGP_FVBNJ_P0034584 | 99.1111 | 97.7778 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 72.2222 | 70.8333 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0035261 | 95.288 | 93.4555 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 72.2222 | 70.8333 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0035258 | 95.288 | 93.4555 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.2064 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0035303 | 99.6032 | 99.2064 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 100 | 100 | mus_musculus | ENSMUSP00000151681 | 100 | 100 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.2064 | mus_musculus_casteij | MGP_CASTEiJ_P0034464 | 99.6032 | 99.2064 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 67.2619 | 62.6984 | mus_musculus_akrj | MGP_AKRJ_P0034746 | 82.6829 | 77.0732 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 91.2698 | 89.881 | mus_musculus_wsbeij | MGP_WSBEiJ_P0034003 | 98.2906 | 96.7949 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.0079 | rattus_norvegicus | ENSRNOP00000048945 | 99.6032 | 99.0079 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 88.6905 | 88.6905 | mus_musculus_dba2j | MGP_DBA2J_P0034598 | 100 | 100 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 88.6905 | 88.6905 | mus_musculus_dba2j | MGP_DBA2J_P0034596 | 100 | 100 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.2064 | mus_musculus_pwkphj | MGP_PWKPhJ_P0034145 | 99.6032 | 99.2064 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.2064 | mus_pahari | MGP_PahariEiJ_P0082395 | 99.6032 | 99.2064 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 87.6984 | 87.5 | mus_musculus_lpj | MGP_LPJ_P0034739 | 95.8785 | 95.6616 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 87.6984 | 87.5 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 99.6032 | 99.0079 | mus_spicilegus | ENSMSIP00000016143 | 90.4504 | 89.9099 |
MGP_NODShiLtJ_G0019597 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 65.0794 | 64.6825 | mus_spretus | MGP_SPRETEiJ_P0033771 | 98.2036 | 97.6048 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |