RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0035316 | Gene ID |
|
Accession |
- |
Symbol |
Ttc21a |
Alias |
- |
Full Name |
tetratricopeptide repeat domain 21A |
Status |
Confidence |
Length |
30077 bases |
Strand |
Plus strand |
Position |
9 : 123082630 - 123112706 |
RNA binding domain |
PPR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0094933 |
PPR |
PF01535 |
1.2e-05 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Ttc21a-001 |
MGP_LPJ_T0094933 |
4182 |
1314aa |
MGP_LPJ_P0094933"/note="transcript_id=MGP_LPJ_T0094933 |
- |
MGP_LPJ_T0094934 |
4041 |
No protein |
- |
- |
MGP_LPJ_T0094935 |
3326 |
No protein |
- |
- |
MGP_LPJ_T0094936 |
827 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0054908 | 71.4068 | 52.1673 | mus_musculus_lpj | MGP_LPJ_P0094933 | 71.4612 | 52.207 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 95.4338 | 94.3683 | mus_caroli | MGP_CAROLIEiJ_P0090576 | 96.092 | 95.0192 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_balbcj | MGP_BALBcJ_P0095216 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_aj | MGP_AJ_P0095296 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0095725 | 100 | 100 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_cbaj | MGP_CBAJ_P0094703 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0095202 | 100 | 100 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_c3hhej | MGP_C3HHeJ_P0094778 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_fvbnj | MGP_FVBNJ_P0094765 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 100 | 100 | mus_musculus | ENSMUSP00000035100 | 100 | 100 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_akrj | MGP_AKRJ_P0095246 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_dba2j | MGP_DBA2J_P0094910 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.6195 | 99.1629 | mus_spretus | MGP_SPRETEiJ_P0094318 | 99.6195 | 99.1629 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.6956 | mus_musculus_casteij | MGP_CASTEiJ_P0095389 | 99.9239 | 99.6956 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0096066 | 100 | 100 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 97.9452 | 96.347 | mus_pahari | MGP_PahariEiJ_P0026252 | 97.9452 | 96.347 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.4673 | 99.0868 | mus_spicilegus | ENSMSIP00000002646 | 99.4673 | 99.0868 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0094737 | 100 | 100 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.9239 | 99.9239 | mus_musculus_wsbeij | MGP_WSBEiJ_P0093763 | 99.9239 | 99.9239 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 97.6408 | 95.2055 | rattus_norvegicus | ENSRNOP00000051323 | 97.6408 | 95.2055 |
MGP_LPJ_G0035316 | mus_musculus_lpj | MGP_LPJ_P0094933 | 99.7717 | 99.6195 | mus_musculus_pwkphj | MGP_PWKPhJ_P0094817 | 99.7717 | 99.6195 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |