Description

Ensembl ID MGP_LPJ_G0035316 Gene ID Accession -
Symbol Ttc21a Alias - Full Name tetratricopeptide repeat domain 21A
Status Confidence Length 30077 bases Strand Plus strand
Position 9 : 123082630 - 123112706 RNA binding domain PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0094933 PPR PF01535 1.2e-05 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Ttc21a-001 MGP_LPJ_T0094933 4182 1314aa MGP_LPJ_P0094933"/note="transcript_id=MGP_LPJ_T0094933
- MGP_LPJ_T0094934 4041 No protein -
- MGP_LPJ_T0094935 3326 No protein -
- MGP_LPJ_T0094936 827 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P005490871.406852.1673mus_musculus_lpjMGP_LPJ_P009493371.461252.207

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493395.433894.3683mus_caroliMGP_CAROLIEiJ_P009057696.09295.0192
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_balbcjMGP_BALBcJ_P009521699.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_ajMGP_AJ_P009529699.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P0094933100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0095725100100
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_cbajMGP_CBAJ_P009470399.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P0094933100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0095202100100
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_c3hhejMGP_C3HHeJ_P009477899.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_fvbnjMGP_FVBNJ_P009476599.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P0094933100100mus_musculusENSMUSP00000035100100100
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_akrjMGP_AKRJ_P009524699.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_dba2jMGP_DBA2J_P009491099.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.619599.1629mus_spretusMGP_SPRETEiJ_P009431899.619599.1629
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.6956mus_musculus_casteijMGP_CASTEiJ_P009538999.923999.6956
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P0094933100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0096066100100
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493397.945296.347mus_pahariMGP_PahariEiJ_P002625297.945296.347
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.467399.0868mus_spicilegusENSMSIP0000000264699.467399.0868
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P0094933100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0094737100100
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.923999.9239mus_musculus_wsbeijMGP_WSBEiJ_P009376399.923999.9239
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493397.640895.2055rattus_norvegicusENSRNOP0000005132397.640895.2055
MGP_LPJ_G0035316mus_musculus_lpjMGP_LPJ_P009493399.771799.6195mus_musculus_pwkphjMGP_PWKPhJ_P009481799.771799.6195

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression