RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0030764 | Gene ID |
|
Accession |
- |
Symbol |
Ptcd3 |
Alias |
- |
Full Name |
pentatricopeptide repeat domain 3 |
Status |
Confidence |
Length |
30628 bases |
Strand |
Minus strand |
Position |
6 : 72305927 - 72336554 |
RNA binding domain |
PPR_3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0077796 |
PPR_3 |
PF13812 |
2e-12 |
1 |
MGP_LPJ_P0077799 |
PPR_3 |
PF13812 |
2e-12 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Ptcd3-004 |
MGP_LPJ_T0077795 |
1151 |
No protein |
- |
- |
MGP_LPJ_T0077796 |
2571 |
685aa |
MGP_LPJ_P0077796"/note="transcript_id=MGP_LPJ_T0077796 |
- |
MGP_LPJ_T0077797 |
2656 |
284aa |
MGP_LPJ_P0077797"/note="transcript_id=MGP_LPJ_T0077797 |
- |
MGP_LPJ_T0077798 |
2354 |
No protein |
- |
- |
MGP_LPJ_T0077799 |
2058 |
685aa |
MGP_LPJ_P0077799"/note="transcript_id=MGP_LPJ_T0077799 |
- |
MGP_LPJ_T0077800 |
521 |
No protein |
- |
- |
MGP_LPJ_T0077801 |
2680 |
No protein |
- |
- |
MGP_LPJ_T0077802 |
588 |
50aa |
MGP_LPJ_P0077802"/note="transcript_id=MGP_LPJ_T0077802 |
- |
MGP_LPJ_T0077803 |
949 |
No protein |
- |
- |
MGP_LPJ_T0077804 |
853 |
No protein |
- |
- |
MGP_LPJ_T0077805 |
545 |
58aa |
MGP_LPJ_P0077805"/note="transcript_id=MGP_LPJ_T0077805 |
- |
MGP_LPJ_T0077806 |
320 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0030764 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 97.9562 | 96.2044 | mus_caroli | MGP_CAROLIEiJ_P0074267 | 97.5291 | 95.7849 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0078030 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0078086 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0078491 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 98.8321 | 97.9562 | mus_musculus_cbaj | MGP_CBAJ_P0077608 | 98.5444 | 97.671 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0078009 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 98.8321 | 97.9562 | mus_musculus_c3hhej | MGP_C3HHeJ_P0079273 | 98.5444 | 97.671 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0077656 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus | ENSMUSP00000080743 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 99.562 | 99.4161 | mus_musculus_akrj | MGP_AKRJ_P0078001 | 99.562 | 99.4161 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 98.8321 | 97.9562 | mus_musculus_dba2j | MGP_DBA2J_P0077769 | 98.5444 | 97.671 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 98.1022 | 97.5182 | mus_spretus | MGP_SPRETEiJ_P0077155 | 98.3895 | 97.8038 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 99.708 | 99.708 | mus_musculus_casteij | MGP_CASTEiJ_P0078235 | 99.708 | 99.708 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0078741 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 96.6423 | 93.7226 | mus_pahari | MGP_PahariEiJ_P0050342 | 96.5015 | 93.586 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 99.4161 | 98.6861 | mus_spicilegus | ENSMSIP00000009562 | 99.4161 | 98.6861 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 99.562 | 99.562 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0077653 | 99.562 | 99.562 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0076763 | 100 | 100 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 93.8686 | 89.0511 | rattus_norvegicus | ENSRNOP00000097950 | 86.0776 | 81.66 |
MGP_LPJ_G0030764 | mus_musculus_lpj | MGP_LPJ_P0077796 | 99.4161 | 99.2701 | mus_musculus_pwkphj | MGP_PWKPhJ_P0077655 | 99.4161 | 99.2701 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |