Description

Ensembl ID MGP_LPJ_G0030764 Gene ID Accession -
Symbol Ptcd3 Alias - Full Name pentatricopeptide repeat domain 3
Status Confidence Length 30628 bases Strand Minus strand
Position 6 : 72305927 - 72336554 RNA binding domain PPR_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0077796 PPR_3 PF13812 2e-12 1
MGP_LPJ_P0077799 PPR_3 PF13812 2e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Ptcd3-004 MGP_LPJ_T0077795 1151 No protein -
- MGP_LPJ_T0077796 2571 685aa MGP_LPJ_P0077796"/note="transcript_id=MGP_LPJ_T0077796
- MGP_LPJ_T0077797 2656 284aa MGP_LPJ_P0077797"/note="transcript_id=MGP_LPJ_T0077797
- MGP_LPJ_T0077798 2354 No protein -
- MGP_LPJ_T0077799 2058 685aa MGP_LPJ_P0077799"/note="transcript_id=MGP_LPJ_T0077799
- MGP_LPJ_T0077800 521 No protein -
- MGP_LPJ_T0077801 2680 No protein -
- MGP_LPJ_T0077802 588 50aa MGP_LPJ_P0077802"/note="transcript_id=MGP_LPJ_T0077802
- MGP_LPJ_T0077803 949 No protein -
- MGP_LPJ_T0077804 853 No protein -
- MGP_LPJ_T0077805 545 58aa MGP_LPJ_P0077805"/note="transcript_id=MGP_LPJ_T0077805
- MGP_LPJ_T0077806 320 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0030764

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779697.956296.2044mus_caroliMGP_CAROLIEiJ_P007426797.529195.7849
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculus_balbcjMGP_BALBcJ_P0078030100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculus_ajMGP_AJ_P0078086100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0078491100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779698.832197.9562mus_musculus_cbajMGP_CBAJ_P007760898.544497.671
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0078009100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779698.832197.9562mus_musculus_c3hhejMGP_C3HHeJ_P007927398.544497.671
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculus_fvbnjMGP_FVBNJ_P0077656100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculusENSMUSP00000080743100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779699.56299.4161mus_musculus_akrjMGP_AKRJ_P007800199.56299.4161
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779698.832197.9562mus_musculus_dba2jMGP_DBA2J_P007776998.544497.671
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779698.102297.5182mus_spretusMGP_SPRETEiJ_P007715598.389597.8038
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779699.70899.708mus_musculus_casteijMGP_CASTEiJ_P007823599.70899.708
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0078741100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779696.642393.7226mus_pahariMGP_PahariEiJ_P005034296.501593.586
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779699.416198.6861mus_spicilegusENSMSIP0000000956299.416198.6861
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779699.56299.562mus_musculus_nodshiltjMGP_NODShiLtJ_P007765399.56299.562
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P0077796100100mus_musculus_wsbeijMGP_WSBEiJ_P0076763100100
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779693.868689.0511rattus_norvegicusENSRNOP0000009795086.077681.66
MGP_LPJ_G0030764mus_musculus_lpjMGP_LPJ_P007779699.416199.2701mus_musculus_pwkphjMGP_PWKPhJ_P007765599.416199.2701

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression