Description

Ensembl ID MGP_LPJ_G0027523 Gene ID Accession -
Symbol Rprd2 Alias - Full Name regulation of nuclear pre-mRNA domain containing 2
Status Confidence Length 61554 bases Strand Minus strand
Position 3 : 97840926 - 97902479 RNA binding domain CREPT , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0062338 CREPT PF16566 4.6e-07 1
MGP_LPJ_P0062338 CID PF04818 2.3e-28 2
MGP_LPJ_P0062335 CID PF04818 4.8e-28 1
MGP_LPJ_P0062336 CID PF04818 4.9e-28 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rprd2-001 MGP_LPJ_T0062335 7697 1451aa MGP_LPJ_P0062335"/note="transcript_id=MGP_LPJ_T0062335
- MGP_LPJ_T0062336 7755 1469aa MGP_LPJ_P0062336"/note="transcript_id=MGP_LPJ_T0062336
- MGP_LPJ_T0062337 2167 No protein -
- MGP_LPJ_T0062338 3297 473aa MGP_LPJ_P0062338"/note="transcript_id=MGP_LPJ_T0062338
- MGP_LPJ_T0062339 589 No protein -
- MGP_LPJ_T0062340 1051 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P005874347.852827.3006mus_musculus_lpjMGP_LPJ_P006233610.61956.05854
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P004896649.679529.8077mus_musculus_lpjMGP_LPJ_P006233610.55146.33084

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P006233693.669293.0565mus_caroliMGP_CAROLIEiJ_P005923299.350298.7004
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_balbcjMGP_BALBcJ_P0062432100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_ajMGP_AJ_P0062506100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0062930100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_cbajMGP_CBAJ_P0062087100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0062482100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_c3hhejMGP_C3HHeJ_P0062115100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_fvbnjMGP_FVBNJ_P0062174100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculusENSMUSP00000088297100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_akrjMGP_AKRJ_P0062441100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_dba2jMGP_DBA2J_P0062195100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P006233699.455499.047mus_spretusMGP_SPRETEiJ_P006160997.987997.5855
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P006233699.727799.5235mus_musculus_casteijMGP_CASTEiJ_P006241999.727799.5235
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0063123100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P006233698.638597.4813mus_pahariMGP_PahariEiJ_P007020097.183196.0429
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P006233698.366297.9578mus_spicilegusENSMSIP0000000820797.437697.033
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0062169100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P0062336100100mus_musculus_wsbeijMGP_WSBEiJ_P0061390100100
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P006233696.868695.0987rattus_norvegicusENSRNOP0000009250096.083794.3282
MGP_LPJ_G0027523mus_musculus_lpjMGP_LPJ_P006233684.683584.5473mus_musculus_pwkphjMGP_PWKPhJ_P006195898.651998.4933

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression