Description

Ensembl ID MGP_LPJ_G0027152 Gene ID Accession -
Symbol Exosc8 Alias - Full Name exosome component 8
Status Confidence Length 6729 bases Strand Minus strand
Position 3 : 54132491 - 54139219 RNA binding domain RNase_PH , RNase_PH_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0060699 RNase_PH PF01138 4.6e-26 1
MGP_LPJ_P0060699 RNase_PH_C PF03725 5.1e-12 2
MGP_LPJ_P0060703 RNase_PH PF01138 1.3e-14 1
MGP_LPJ_P0060705 RNase_PH PF01138 1e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Exosc8-001 MGP_LPJ_T0060699 1300 276aa MGP_LPJ_P0060699"/note="transcript_id=MGP_LPJ_T0060699
- MGP_LPJ_T0060700 478 No protein -
- MGP_LPJ_T0060701 2316 No protein -
- MGP_LPJ_T0060702 985 No protein -
- MGP_LPJ_T0060703 438 114aa MGP_LPJ_P0060703"/note="transcript_id=MGP_LPJ_T0060703
- MGP_LPJ_T0060704 1983 No protein -
- MGP_LPJ_T0060705 412 130aa MGP_LPJ_P0060705"/note="transcript_id=MGP_LPJ_T0060705
- MGP_LPJ_T0060706 913 No protein -
- MGP_LPJ_T0060707 590 No protein -
- MGP_LPJ_T0060708 389 No protein -
- MGP_LPJ_T0060709 1093 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P009507643.986327.4914mus_musculus_lpjMGP_LPJ_P006069946.376828.9855
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006037830.892416.476mus_musculus_lpjMGP_LPJ_P006069948.91326.087

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006069999.637798.5507mus_caroliMGP_CAROLIEiJ_P005767299.637798.5507
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_balbcjMGP_BALBcJ_P0060782100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_ajMGP_AJ_P0060856100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0061261100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_cbajMGP_CBAJ_P0060452100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0060838100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_c3hhejMGP_C3HHeJ_P0060475100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_fvbnjMGP_FVBNJ_P0060535100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculusENSMUSP00000029316100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_akrjMGP_AKRJ_P0060790100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_dba2jMGP_DBA2J_P0060545100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006069999.637798.913mus_spretusMGP_SPRETEiJ_P005994599.637798.913
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006069999.637799.2754mus_musculus_casteijMGP_CASTEiJ_P006077399.637799.2754
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0061449100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006069999.275496.7391mus_pahariMGP_PahariEiJ_P006862999.275496.7391
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006069991.304388.4058mus_spicilegusENSMSIP000000132348481.3333
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0060504100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P0060699100100mus_musculus_wsbeijMGP_WSBEiJ_P0059755100100
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006069997.463895.2899rattus_norvegicusENSRNOP0000007390398.175295.9854
MGP_LPJ_G0027152mus_musculus_lpjMGP_LPJ_P006069999.637799.2754mus_musculus_pwkphjMGP_PWKPhJ_P006032599.637799.2754

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression