RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0027152 | Gene ID |
|
Accession |
- |
Symbol |
Exosc8 |
Alias |
- |
Full Name |
exosome component 8 |
Status |
Confidence |
Length |
6729 bases |
Strand |
Minus strand |
Position |
3 : 54132491 - 54139219 |
RNA binding domain |
RNase_PH , RNase_PH_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0060699 |
RNase_PH |
PF01138 |
4.6e-26 |
1 |
MGP_LPJ_P0060699 |
RNase_PH_C |
PF03725 |
5.1e-12 |
2 |
MGP_LPJ_P0060703 |
RNase_PH |
PF01138 |
1.3e-14 |
1 |
MGP_LPJ_P0060705 |
RNase_PH |
PF01138 |
1e-13 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Exosc8-001 |
MGP_LPJ_T0060699 |
1300 |
276aa |
MGP_LPJ_P0060699"/note="transcript_id=MGP_LPJ_T0060699 |
- |
MGP_LPJ_T0060700 |
478 |
No protein |
- |
- |
MGP_LPJ_T0060701 |
2316 |
No protein |
- |
- |
MGP_LPJ_T0060702 |
985 |
No protein |
- |
- |
MGP_LPJ_T0060703 |
438 |
114aa |
MGP_LPJ_P0060703"/note="transcript_id=MGP_LPJ_T0060703 |
- |
MGP_LPJ_T0060704 |
1983 |
No protein |
- |
- |
MGP_LPJ_T0060705 |
412 |
130aa |
MGP_LPJ_P0060705"/note="transcript_id=MGP_LPJ_T0060705 |
- |
MGP_LPJ_T0060706 |
913 |
No protein |
- |
- |
MGP_LPJ_T0060707 |
590 |
No protein |
- |
- |
MGP_LPJ_T0060708 |
389 |
No protein |
- |
- |
MGP_LPJ_T0060709 |
1093 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0095076 | 43.9863 | 27.4914 | mus_musculus_lpj | MGP_LPJ_P0060699 | 46.3768 | 28.9855 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060378 | 30.8924 | 16.476 | mus_musculus_lpj | MGP_LPJ_P0060699 | 48.913 | 26.087 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 99.6377 | 98.5507 | mus_caroli | MGP_CAROLIEiJ_P0057672 | 99.6377 | 98.5507 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0060782 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0060856 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061261 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0060452 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0060838 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0060475 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0060535 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus | ENSMUSP00000029316 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0060790 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0060545 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 99.6377 | 98.913 | mus_spretus | MGP_SPRETEiJ_P0059945 | 99.6377 | 98.913 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 99.6377 | 99.2754 | mus_musculus_casteij | MGP_CASTEiJ_P0060773 | 99.6377 | 99.2754 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0061449 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 99.2754 | 96.7391 | mus_pahari | MGP_PahariEiJ_P0068629 | 99.2754 | 96.7391 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 91.3043 | 88.4058 | mus_spicilegus | ENSMSIP00000013234 | 84 | 81.3333 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0060504 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0059755 | 100 | 100 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 97.4638 | 95.2899 | rattus_norvegicus | ENSRNOP00000073903 | 98.1752 | 95.9854 |
MGP_LPJ_G0027152 | mus_musculus_lpj | MGP_LPJ_P0060699 | 99.6377 | 99.2754 | mus_musculus_pwkphj | MGP_PWKPhJ_P0060325 | 99.6377 | 99.2754 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |