Description

Ensembl ID MGP_LPJ_G0025428 Gene ID Accession -
Symbol Surf6 Alias - Full Name surfeit gene 6
Status Confidence Length 16614 bases Strand Minus strand
Position 2 : 24802065 - 24818678 RNA binding domain SURF6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0053273 SURF6 PF04935 5.7e-36 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Surf6-003 MGP_LPJ_T0053270 1372 No protein -
- MGP_LPJ_T0053271 653 No protein -
- MGP_LPJ_T0053272 680 No protein -
- MGP_LPJ_T0053273 2971 355aa MGP_LPJ_P0053273"/note="transcript_id=MGP_LPJ_T0053273
- MGP_LPJ_T0053274 894 208aa MGP_LPJ_P0053274"/note="transcript_id=MGP_LPJ_T0053274
- MGP_LPJ_T0053275 748 No protein -
- MGP_LPJ_T0053276 372 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0025428

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P005327397.464897.1831mus_caroliMGP_CAROLIEiJ_P005042797.464897.1831
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_balbcjMGP_BALBcJ_P0053374100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_ajMGP_AJ_P0053428100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0053864100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_cbajMGP_CBAJ_P0053050100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0053417100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_c3hhejMGP_C3HHeJ_P0053104100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_fvbnjMGP_FVBNJ_P0053120100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculusENSMUSP00000048457100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_akrjMGP_AKRJ_P0053384100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_dba2jMGP_DBA2J_P0053161100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P005327398.309998.3099mus_spretusMGP_SPRETEiJ_P005245398.309998.3099
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P005327310099.7183mus_musculus_casteijMGP_CASTEiJ_P005327410099.7183
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0053999100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P005327396.33893.8028mus_pahariMGP_PahariEiJ_P006145196.610294.0678
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P005327398.309998.0282mus_spicilegusENSMSIP0000002256698.309998.0282
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0053107100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_wsbeijMGP_WSBEiJ_P0052388100100
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P005327384.788780.2817rattus_norvegicusENSRNOP0000000669992.331387.4233
MGP_LPJ_G0025428mus_musculus_lpjMGP_LPJ_P0053273100100mus_musculus_pwkphjMGP_PWKPhJ_P0052876100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression