Description

Ensembl ID MGP_LPJ_G0024115 Gene ID Accession -
Symbol Rprd1a Alias - Full Name regulation of nuclear pre-mRNA domain containing 1A
Status Confidence Length 47895 bases Strand Minus strand
Position 18 : 22404522 - 22452416 RNA binding domain CREPT , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0048966 CREPT PF16566 2.7e-58 1
MGP_LPJ_P0048966 CID PF04818 2.4e-38 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rprd1a-201 MGP_LPJ_T0048966 4308 312aa MGP_LPJ_P0048966"/note="transcript_id=MGP_LPJ_T0048966

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P005874380.981665.6442mus_musculus_lpjMGP_LPJ_P004896684.615468.5897
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P006233610.55146.33084mus_musculus_lpjMGP_LPJ_P004896649.679529.8077

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_balbcjMGP_BALBcJ_P0049075100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_ajMGP_AJ_P0049113100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0049567100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_cbajMGP_CBAJ_P0048742100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0049135100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_c3hhejMGP_C3HHeJ_P0048820100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_fvbnjMGP_FVBNJ_P0048815100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculusENSMUSP00000043618100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_akrjMGP_AKRJ_P0049075100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_dba2jMGP_DBA2J_P0048851100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_spretusMGP_SPRETEiJ_P0048108100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_casteijMGP_CASTEiJ_P0048911100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0049671100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_spicilegusENSMSIP0000002615075.180775.1807
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0048817100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_wsbeijMGP_WSBEiJ_P0048119100100
MGP_LPJ_G0024115mus_musculus_lpjMGP_LPJ_P0048966100100mus_musculus_pwkphjMGP_PWKPhJ_P0048510100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression