Description

Ensembl ID MGP_LPJ_G0023994 Gene ID Accession -
Symbol Lrpprc Alias - Full Name leucine-rich PPR-motif containing
Status Confidence Length 92809 bases Strand Minus strand
Position 17 : 88654342 - 88747150 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0048539 PPR_3 PF13812 1.7e-24 1
MGP_LPJ_P0048539 PPR_3 PF13812 1.7e-24 2
MGP_LPJ_P0048539 PPR_long PF17177 3.9e-16 3
MGP_LPJ_P0048539 PPR PF01535 6.9e-23 4
MGP_LPJ_P0048539 PPR PF01535 6.9e-23 5
MGP_LPJ_P0048539 PPR PF01535 6.9e-23 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Lrpprc-001 MGP_LPJ_T0048539 4393 1392aa MGP_LPJ_P0048539"/note="transcript_id=MGP_LPJ_T0048539
- MGP_LPJ_T0048540 809 No protein -
- MGP_LPJ_T0048541 565 141aa MGP_LPJ_P0048541"/note="transcript_id=MGP_LPJ_T0048541
- MGP_LPJ_T0048542 513 No protein -
- MGP_LPJ_T0048543 2824 No protein -
- MGP_LPJ_T0048544 4012 No protein -
- MGP_LPJ_T0048545 967 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0023994

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853997.916795.546mus_caroliMGP_CAROLIEiJ_P004575597.916795.546
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_balbcjMGP_BALBcJ_P0048651100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_ajMGP_AJ_P0048690100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0049144100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_cbajMGP_CBAJ_P0048324100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0048711100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_c3hhejMGP_C3HHeJ_P0048398100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853999.856399.7845mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculusENSMUSP00000107927100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_akrjMGP_AKRJ_P0048652100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853999.856399.7126mus_musculus_dba2jMGP_DBA2J_P004842699.856399.7126
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853999.353498.4914mus_spretusMGP_SPRETEiJ_P004767699.353498.4914
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853999.856399.6408mus_musculus_casteijMGP_CASTEiJ_P004847399.856399.6408
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853999.856399.7126mus_musculus_nzohlltjMGP_NZOHlLtJ_P004924199.856399.7126
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853996.551793.3908mus_pahariMGP_PahariEiJ_P004526996.551793.3908
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853998.850698.1322mus_spicilegusENSMSIP0000001302399.135498.415
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853999.856399.7845mus_musculus_nodshiltjMGP_NODShiLtJ_P004839499.856399.7845
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P0048539100100mus_musculus_wsbeijMGP_WSBEiJ_P0047698100100
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853995.186890.3017rattus_norvegicusENSRNOP0000000820094.778389.9142
MGP_LPJ_G0023994mus_musculus_lpjMGP_LPJ_P004853999.928299.7845mus_musculus_pwkphjMGP_PWKPhJ_P004807099.928299.7845

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression