Description

Ensembl ID MGP_LPJ_G0023335 Gene ID Accession -
Symbol Snrpc Alias - Full Name U1 small nuclear ribonucleoprotein C
Status Confidence Length 13621 bases Strand Plus strand
Position 17 : 27443288 - 27456908 RNA binding domain zf-U1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0046305 zf-U1 PF06220 1.6e-22 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Snrpc-001 MGP_LPJ_T0046305 739 139aa MGP_LPJ_P0046305"/note="transcript_id=MGP_LPJ_T0046305
- MGP_LPJ_T0046306 5904 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0023335

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_caroliMGP_CAROLIEiJ_P004357387.421487.4214
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_balbcjMGP_BALBcJ_P004641387.421487.4214
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_ajMGP_AJ_P0046451100100
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630585.611584.8921mus_musculus_c57bl6njMGP_C57BL6NJ_P004689613.709713.5945
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_cbajMGP_CBAJ_P004607990.849790.8497
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_129s1svimjMGP_129S1SvImJ_P004647787.421487.4214
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_c3hhejMGP_C3HHeJ_P004614490.849790.8497
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630590.647590.6475mus_musculus_fvbnjMGP_FVBNJ_P004616792.647192.6471
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630598.561198.5611mus_musculusENSMUSP0000015664475.274775.2747
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_akrjMGP_AKRJ_P004639990.849790.8497
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630588.489287.7698mus_musculus_dba2jMGP_DBA2J_P004619467.213166.6667
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630584.892184.8921mus_spretusMGP_SPRETEiJ_P004548498.333398.3333
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_casteijMGP_CASTEiJ_P0046242100100
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630588.489288.4892mus_musculus_nzohlltjMGP_NZOHlLtJ_P004699431.218331.2183
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630587.050484.8921mus_pahariMGP_PahariEiJ_P005587594.531292.1875
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630598.561198.5611mus_spicilegusENSMSIP0000000720075.274775.2747
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630591.366991.3669mus_musculus_nodshiltjMGP_NODShiLtJ_P004614220.255220.2552
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630587.050485.6115mus_musculus_wsbeijMGP_WSBEiJ_P004551595.275693.7008
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630599.280699.2806rattus_norvegicusENSRNOP0000008030476.243176.2431
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P004630510099.2806rattus_norvegicusENSRNOP0000008645687.421486.7924
MGP_LPJ_G0023335mus_musculus_lpjMGP_LPJ_P0046305100100mus_musculus_pwkphjMGP_PWKPhJ_P004583687.421487.4214

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression