RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0023335 | Gene ID |
|
Accession |
- |
Symbol |
Snrpc |
Alias |
- |
Full Name |
U1 small nuclear ribonucleoprotein C |
Status |
Confidence |
Length |
13621 bases |
Strand |
Plus strand |
Position |
17 : 27443288 - 27456908 |
RNA binding domain |
zf-U1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0046305 |
zf-U1 |
PF06220 |
1.6e-22 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Snrpc-001 |
MGP_LPJ_T0046305 |
739 |
139aa |
MGP_LPJ_P0046305"/note="transcript_id=MGP_LPJ_T0046305 |
- |
MGP_LPJ_T0046306 |
5904 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0023335 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0043573 | 87.4214 | 87.4214 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0046413 | 87.4214 | 87.4214 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0046451 | 100 | 100 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 85.6115 | 84.8921 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0046896 | 13.7097 | 13.5945 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0046079 | 90.8497 | 90.8497 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0046477 | 87.4214 | 87.4214 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0046144 | 90.8497 | 90.8497 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 90.6475 | 90.6475 | mus_musculus_fvbnj | MGP_FVBNJ_P0046167 | 92.6471 | 92.6471 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 98.5611 | 98.5611 | mus_musculus | ENSMUSP00000156644 | 75.2747 | 75.2747 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0046399 | 90.8497 | 90.8497 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 88.4892 | 87.7698 | mus_musculus_dba2j | MGP_DBA2J_P0046194 | 67.2131 | 66.6667 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 84.8921 | 84.8921 | mus_spretus | MGP_SPRETEiJ_P0045484 | 98.3333 | 98.3333 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0046242 | 100 | 100 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 88.4892 | 88.4892 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0046994 | 31.2183 | 31.2183 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 87.0504 | 84.8921 | mus_pahari | MGP_PahariEiJ_P0055875 | 94.5312 | 92.1875 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 98.5611 | 98.5611 | mus_spicilegus | ENSMSIP00000007200 | 75.2747 | 75.2747 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 91.3669 | 91.3669 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0046142 | 20.2552 | 20.2552 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 87.0504 | 85.6115 | mus_musculus_wsbeij | MGP_WSBEiJ_P0045515 | 95.2756 | 93.7008 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 99.2806 | 99.2806 | rattus_norvegicus | ENSRNOP00000080304 | 76.2431 | 76.2431 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 99.2806 | rattus_norvegicus | ENSRNOP00000086456 | 87.4214 | 86.7924 |
MGP_LPJ_G0023335 | mus_musculus_lpj | MGP_LPJ_P0046305 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0045836 | 87.4214 | 87.4214 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |