Description

Ensembl ID MGP_LPJ_G0022507 Gene ID Accession -
Symbol Trmt2a Alias - Full Name TRM2 tRNA methyltransferase 2A
Status Confidence Length 5890 bases Strand Plus strand
Position 16 : 15240011 - 15245900 RNA binding domain Methyltransf_31 , tRNA_U5-meth_tr , MTS
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0043391 Methyltransf_31 PF13847 6.6e-11 1
MGP_LPJ_P0043391 tRNA_U5-meth_tr PF05958 3.6e-16 2
MGP_LPJ_P0043391 MTS PF05175 9.4e-06 3
MGP_LPJ_P0043390 Methyltransf_31 PF13847 2.2e-10 1
MGP_LPJ_P0043390 tRNA_U5-meth_tr PF05958 4.3e-17 2
MGP_LPJ_P0043390 MTS PF05175 3e-05 3
MGP_LPJ_P0043385 Methyltransf_31 PF13847 2.2e-10 1
MGP_LPJ_P0043385 tRNA_U5-meth_tr PF05958 4.3e-17 2
MGP_LPJ_P0043385 MTS PF05175 3e-05 3
MGP_LPJ_P0043386 Methyltransf_31 PF13847 4.9e-06 1
MGP_LPJ_P0043386 tRNA_U5-meth_tr PF05958 1.1e-09 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Trmt2a-003 MGP_LPJ_T0043384 2805 No protein -
- MGP_LPJ_T0043385 2367 613aa MGP_LPJ_P0043385"/note="transcript_id=MGP_LPJ_T0043385
- MGP_LPJ_T0043386 3520 574aa MGP_LPJ_P0043386"/note="transcript_id=MGP_LPJ_T0043386
- MGP_LPJ_T0043387 2082 No protein -
- MGP_LPJ_T0043388 2971 No protein -
- MGP_LPJ_T0043389 2553 No protein -
- MGP_LPJ_T0043390 2235 613aa MGP_LPJ_P0043390"/note="transcript_id=MGP_LPJ_T0043390
- MGP_LPJ_T0043391 842 280aa MGP_LPJ_P0043391"/note="transcript_id=MGP_LPJ_T0043391
- MGP_LPJ_T0043392 276 70aa MGP_LPJ_P0043392"/note="transcript_id=MGP_LPJ_T0043392
- MGP_LPJ_T0043393 603 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P009708555.983840.568mus_musculus_lpjMGP_LPJ_P004338545.024532.6264

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338599.021298.6949mus_caroliMGP_CAROLIEiJ_P004076798.859998.5342
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_balbcjMGP_BALBcJ_P0043509100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_ajMGP_AJ_P0043524100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0043995100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_cbajMGP_CBAJ_P0043161100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0043557100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_c3hhejMGP_C3HHeJ_P0043251100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_fvbnjMGP_FVBNJ_P0043271100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculusENSMUSP00000111304100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_akrjMGP_AKRJ_P0043499100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_dba2jMGP_DBA2J_P0043320100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338599.836999.8369mus_spretusMGP_SPRETEiJ_P004261899.836999.8369
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338599.510699.5106mus_musculus_casteijMGP_CASTEiJ_P004335499.510699.5106
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0044033100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338597.226896.9005mus_pahariMGP_PahariEiJ_P002815297.226896.9005
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338599.836999.8369mus_spicilegusENSMSIP0000002412899.836999.8369
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P0043385100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0043254100100
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338599.836999.8369mus_musculus_wsbeijMGP_WSBEiJ_P004263599.836999.8369
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338596.24893.801rattus_norvegicusENSRNOP0000008882595.62493.1929
MGP_LPJ_G0022507mus_musculus_lpjMGP_LPJ_P004338599.347599.3475mus_musculus_pwkphjMGP_PWKPhJ_P004294099.347599.3475

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression