RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0022507 | Gene ID |
|
Accession |
- |
Symbol |
Trmt2a |
Alias |
- |
Full Name |
TRM2 tRNA methyltransferase 2A |
Status |
Confidence |
Length |
5890 bases |
Strand |
Plus strand |
Position |
16 : 15240011 - 15245900 |
RNA binding domain |
Methyltransf_31 , tRNA_U5-meth_tr , MTS |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0043391 |
Methyltransf_31 |
PF13847 |
6.6e-11 |
1 |
MGP_LPJ_P0043391 |
tRNA_U5-meth_tr |
PF05958 |
3.6e-16 |
2 |
MGP_LPJ_P0043391 |
MTS |
PF05175 |
9.4e-06 |
3 |
MGP_LPJ_P0043390 |
Methyltransf_31 |
PF13847 |
2.2e-10 |
1 |
MGP_LPJ_P0043390 |
tRNA_U5-meth_tr |
PF05958 |
4.3e-17 |
2 |
MGP_LPJ_P0043390 |
MTS |
PF05175 |
3e-05 |
3 |
MGP_LPJ_P0043385 |
Methyltransf_31 |
PF13847 |
2.2e-10 |
1 |
MGP_LPJ_P0043385 |
tRNA_U5-meth_tr |
PF05958 |
4.3e-17 |
2 |
MGP_LPJ_P0043385 |
MTS |
PF05175 |
3e-05 |
3 |
MGP_LPJ_P0043386 |
Methyltransf_31 |
PF13847 |
4.9e-06 |
1 |
MGP_LPJ_P0043386 |
tRNA_U5-meth_tr |
PF05958 |
1.1e-09 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Trmt2a-003 |
MGP_LPJ_T0043384 |
2805 |
No protein |
- |
- |
MGP_LPJ_T0043385 |
2367 |
613aa |
MGP_LPJ_P0043385"/note="transcript_id=MGP_LPJ_T0043385 |
- |
MGP_LPJ_T0043386 |
3520 |
574aa |
MGP_LPJ_P0043386"/note="transcript_id=MGP_LPJ_T0043386 |
- |
MGP_LPJ_T0043387 |
2082 |
No protein |
- |
- |
MGP_LPJ_T0043388 |
2971 |
No protein |
- |
- |
MGP_LPJ_T0043389 |
2553 |
No protein |
- |
- |
MGP_LPJ_T0043390 |
2235 |
613aa |
MGP_LPJ_P0043390"/note="transcript_id=MGP_LPJ_T0043390 |
- |
MGP_LPJ_T0043391 |
842 |
280aa |
MGP_LPJ_P0043391"/note="transcript_id=MGP_LPJ_T0043391 |
- |
MGP_LPJ_T0043392 |
276 |
70aa |
MGP_LPJ_P0043392"/note="transcript_id=MGP_LPJ_T0043392 |
- |
MGP_LPJ_T0043393 |
603 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0097085 | 55.9838 | 40.568 | mus_musculus_lpj | MGP_LPJ_P0043385 | 45.0245 | 32.6264 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 99.0212 | 98.6949 | mus_caroli | MGP_CAROLIEiJ_P0040767 | 98.8599 | 98.5342 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0043509 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0043524 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0043995 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0043161 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0043557 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0043251 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0043271 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus | ENSMUSP00000111304 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0043499 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0043320 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 99.8369 | 99.8369 | mus_spretus | MGP_SPRETEiJ_P0042618 | 99.8369 | 99.8369 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 99.5106 | 99.5106 | mus_musculus_casteij | MGP_CASTEiJ_P0043354 | 99.5106 | 99.5106 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0044033 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 97.2268 | 96.9005 | mus_pahari | MGP_PahariEiJ_P0028152 | 97.2268 | 96.9005 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 99.8369 | 99.8369 | mus_spicilegus | ENSMSIP00000024128 | 99.8369 | 99.8369 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0043254 | 100 | 100 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 99.8369 | 99.8369 | mus_musculus_wsbeij | MGP_WSBEiJ_P0042635 | 99.8369 | 99.8369 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 96.248 | 93.801 | rattus_norvegicus | ENSRNOP00000088825 | 95.624 | 93.1929 |
MGP_LPJ_G0022507 | mus_musculus_lpj | MGP_LPJ_P0043385 | 99.3475 | 99.3475 | mus_musculus_pwkphj | MGP_PWKPhJ_P0042940 | 99.3475 | 99.3475 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |