Description

Ensembl ID MGP_LPJ_G0021888 Gene ID Accession -
Symbol Sharpin Alias - Full Name SHANK-associated RH domain interacting protein
Status Confidence Length 4073 bases Strand Minus strand
Position 15 : 76508529 - 76512601 RNA binding domain zf-RanBP
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0041226 zf-RanBP PF00641 1.8e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sharpin-002 MGP_LPJ_T0041222 1896 No protein -
- MGP_LPJ_T0041223 1734 380aa MGP_LPJ_P0041223"/note="transcript_id=MGP_LPJ_T0041223
- MGP_LPJ_T0041224 1905 No protein -
- MGP_LPJ_T0041225 1669 No protein -
- MGP_LPJ_T0041226 418 82aa MGP_LPJ_P0041226"/note="transcript_id=MGP_LPJ_T0041226
- MGP_LPJ_T0041227 777 No protein -
- MGP_LPJ_T0041228 835 157aa MGP_LPJ_P0041228"/note="transcript_id=MGP_LPJ_T0041228
- MGP_LPJ_T0041229 819 No protein -
- MGP_LPJ_T0041230 835 No protein -
- MGP_LPJ_T0041231 1884 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P007543513.51658.02198mus_musculus_lpjMGP_LPJ_P004122332.368419.2105
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P005814624.803217.7165mus_musculus_lpjMGP_LPJ_P004122333.157923.6842

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P004122398.157997.6316mus_caroliMGP_CAROLIEiJ_P003863599.202198.6702
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_balbcjMGP_BALBcJ_P0041355100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_ajMGP_AJ_P0041358100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0041832100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_cbajMGP_CBAJ_P0040999100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0041395100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_c3hhejMGP_C3HHeJ_P0041090100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_fvbnjMGP_FVBNJ_P0041126100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculusENSMUSP00000023211100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_akrjMGP_AKRJ_P0041330100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_dba2jMGP_DBA2J_P0041152100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P004122399.736899.7368mus_spretusMGP_SPRETEiJ_P004044599.736899.7368
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_casteijMGP_CASTEiJ_P0041156100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0041871100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P004122397.894796.5789mus_pahariMGP_PahariEiJ_P004200798.412797.09
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P004122398.421198.4211mus_spicilegusENSMSIP0000002808498.941898.9418
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0041104100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P0041223100100mus_musculus_wsbeijMGP_WSBEiJ_P0040484100100
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P004122392.631688.9474rattus_norvegicusENSRNOP0000001803292.388588.7139
MGP_LPJ_G0021888mus_musculus_lpjMGP_LPJ_P004122399.736899.7368mus_musculus_pwkphjMGP_PWKPhJ_P004073799.736899.7368

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression