RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0021644 | Gene ID |
|
Accession |
- |
Symbol |
Drosha |
Alias |
- |
Full Name |
drosha, ribonuclease type III |
Status |
Confidence |
Length |
116208 bases |
Strand |
Plus strand |
Position |
15 : 10011302 - 10127509 |
RNA binding domain |
dsrm , Ribonucleas_3_3 , Ribonuclease_3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0040497 |
dsrm |
PF00035 |
3.4e-14 |
1 |
MGP_LPJ_P0040497 |
Ribonucleas_3_3 |
PF14622 |
1.5e-43 |
2 |
MGP_LPJ_P0040497 |
Ribonucleas_3_3 |
PF14622 |
1.5e-43 |
3 |
MGP_LPJ_P0040497 |
Ribonuclease_3 |
PF00636 |
1.3e-42 |
4 |
MGP_LPJ_P0040497 |
Ribonuclease_3 |
PF00636 |
1.3e-42 |
5 |
MGP_LPJ_P0040492 |
dsrm |
PF00035 |
4.2e-14 |
1 |
MGP_LPJ_P0040492 |
Ribonucleas_3_3 |
PF14622 |
3.6e-43 |
2 |
MGP_LPJ_P0040492 |
Ribonucleas_3_3 |
PF14622 |
3.6e-43 |
3 |
MGP_LPJ_P0040492 |
Ribonuclease_3 |
PF00636 |
2.6e-42 |
4 |
MGP_LPJ_P0040492 |
Ribonuclease_3 |
PF00636 |
2.6e-42 |
5 |
MGP_LPJ_P0040493 |
dsrm |
PF00035 |
4.2e-14 |
1 |
MGP_LPJ_P0040493 |
Ribonucleas_3_3 |
PF14622 |
3.6e-43 |
2 |
MGP_LPJ_P0040493 |
Ribonucleas_3_3 |
PF14622 |
3.6e-43 |
3 |
MGP_LPJ_P0040493 |
Ribonuclease_3 |
PF00636 |
2.6e-42 |
4 |
MGP_LPJ_P0040493 |
Ribonuclease_3 |
PF00636 |
2.6e-42 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Drosha-001 |
MGP_LPJ_T0040492 |
4570 |
1373aa |
MGP_LPJ_P0040492"/note="transcript_id=MGP_LPJ_T0040492 |
- |
MGP_LPJ_T0040493 |
4471 |
1373aa |
MGP_LPJ_P0040493"/note="transcript_id=MGP_LPJ_T0040493 |
- |
MGP_LPJ_T0040494 |
830 |
No protein |
- |
- |
MGP_LPJ_T0040495 |
863 |
No protein |
- |
- |
MGP_LPJ_T0040496 |
699 |
No protein |
- |
- |
MGP_LPJ_T0040497 |
3050 |
1015aa |
MGP_LPJ_P0040497"/note="transcript_id=MGP_LPJ_T0040497 |
- |
MGP_LPJ_T0040498 |
3248 |
No protein |
- |
- |
MGP_LPJ_T0040499 |
588 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0021644 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.6358 | 99.2717 | mus_caroli | MGP_CAROLIEiJ_P0037924 | 99.6358 | 99.2717 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_balbcj | MGP_BALBcJ_P0040622 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_aj | MGP_AJ_P0040621 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0041089 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_cbaj | MGP_CBAJ_P0040277 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0040659 | 100 | 100 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_c3hhej | MGP_C3HHeJ_P0040358 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_fvbnj | MGP_FVBNJ_P0040389 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus | ENSMUSP00000129279 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_akrj | MGP_AKRJ_P0040582 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_dba2j | MGP_DBA2J_P0040427 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.7087 | 99.3445 | mus_spretus | MGP_SPRETEiJ_P0039689 | 99.7087 | 99.3445 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.8543 | 99.8543 | mus_musculus_casteij | MGP_CASTEiJ_P0040396 | 99.8543 | 99.8543 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0041136 | 100 | 100 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.2717 | 98.7618 | mus_pahari | MGP_PahariEiJ_P0027422 | 99.2717 | 98.7618 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.7815 | 99.6358 | mus_spicilegus | ENSMSIP00000017491 | 99.7815 | 99.6358 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0040379 | 100 | 100 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.9272 | 99.9272 | mus_musculus_wsbeij | MGP_WSBEiJ_P0039760 | 99.9272 | 99.9272 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 98.9803 | 97.815 | rattus_norvegicus | ENSRNOP00000050633 | 98.9803 | 97.815 |
MGP_LPJ_G0021644 | mus_musculus_lpj | MGP_LPJ_P0040492 | 99.8543 | 99.8543 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039993 | 99.8543 | 99.8543 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |