Description

Ensembl ID MGP_LPJ_G0020422 Gene ID Accession -
Symbol Nup153 Alias - Full Name nucleoporin 153
Status Confidence Length 48632 bases Strand Minus strand
Position 13 : 45688654 - 45737285 RNA binding domain zf-RanBP
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0036794 zf-RanBP PF00641 1.5e-40 1
MGP_LPJ_P0036794 zf-RanBP PF00641 1.5e-40 2
MGP_LPJ_P0036794 zf-RanBP PF00641 1.5e-40 3
MGP_LPJ_P0036794 zf-RanBP PF00641 1.5e-40 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Nup153-001 MGP_LPJ_T0036794 6109 1462aa MGP_LPJ_P0036794"/note="transcript_id=MGP_LPJ_T0036794
- MGP_LPJ_T0036795 597 No protein -
- MGP_LPJ_T0036796 557 No protein -
- MGP_LPJ_T0036797 711 No protein -
- MGP_LPJ_T0036798 767 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P005386623.932915.1559mus_musculus_lpjMGP_LPJ_P003679434.131321.6142
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003635130.967116.358mus_musculus_lpjMGP_LPJ_P003679420.588210.8755
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P007473737.333323.25mus_musculus_lpjMGP_LPJ_P003679430.64319.0834

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679498.768897.948mus_caroliMGP_CAROLIEiJ_P003423798.566697.7474
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_balbcjMGP_BALBcJ_P0036853100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_ajMGP_AJ_P0036833100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0037311100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_cbajMGP_CBAJ_P0036515100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679499.931699.9316mus_musculus_129s1svimjMGP_129S1SvImJ_P003690199.863399.8633
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_c3hhejMGP_C3HHeJ_P0036607100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_fvbnjMGP_FVBNJ_P0036629100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculusENSMUSP00000021803100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679499.931699.9316mus_musculus_akrjMGP_AKRJ_P003680299.863399.8633
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_dba2jMGP_DBA2J_P0036659100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679498.97498.7688mus_spretusMGP_SPRETEiJ_P003585898.97498.7688
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679499.726499.5896mus_musculus_casteijMGP_CASTEiJ_P003654599.658299.5215
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0037363100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679498.426897.264mus_pahariMGP_PahariEiJ_P004084398.292497.1311
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679499.384499.2476mus_spicilegusENSMSIP0000000102299.248699.112
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P0036794100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0036625100100
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679410099.9316mus_musculus_wsbeijMGP_WSBEiJ_P003602699.931699.8633
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679496.23894.528rattus_norvegicusENSRNOP0000000197995.844794.1417
MGP_LPJ_G0020422mus_musculus_lpjMGP_LPJ_P003679499.931699.9316mus_musculus_pwkphjMGP_PWKPhJ_P003618799.863399.8633

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression