RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0020422 | Gene ID |
|
Accession |
- |
Symbol |
Nup153 |
Alias |
- |
Full Name |
nucleoporin 153 |
Status |
Confidence |
Length |
48632 bases |
Strand |
Minus strand |
Position |
13 : 45688654 - 45737285 |
RNA binding domain |
zf-RanBP |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0036794 |
zf-RanBP |
PF00641 |
1.5e-40 |
1 |
MGP_LPJ_P0036794 |
zf-RanBP |
PF00641 |
1.5e-40 |
2 |
MGP_LPJ_P0036794 |
zf-RanBP |
PF00641 |
1.5e-40 |
3 |
MGP_LPJ_P0036794 |
zf-RanBP |
PF00641 |
1.5e-40 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Nup153-001 |
MGP_LPJ_T0036794 |
6109 |
1462aa |
MGP_LPJ_P0036794"/note="transcript_id=MGP_LPJ_T0036794 |
- |
MGP_LPJ_T0036795 |
597 |
No protein |
- |
- |
MGP_LPJ_T0036796 |
557 |
No protein |
- |
- |
MGP_LPJ_T0036797 |
711 |
No protein |
- |
- |
MGP_LPJ_T0036798 |
767 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0053866 | 23.9329 | 15.1559 | mus_musculus_lpj | MGP_LPJ_P0036794 | 34.1313 | 21.6142 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036351 | 30.9671 | 16.358 | mus_musculus_lpj | MGP_LPJ_P0036794 | 20.5882 | 10.8755 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0074737 | 37.3333 | 23.25 | mus_musculus_lpj | MGP_LPJ_P0036794 | 30.643 | 19.0834 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 98.7688 | 97.948 | mus_caroli | MGP_CAROLIEiJ_P0034237 | 98.5666 | 97.7474 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0036853 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0036833 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0037311 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0036515 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 99.9316 | 99.9316 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0036901 | 99.8633 | 99.8633 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036607 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0036629 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus | ENSMUSP00000021803 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 99.9316 | 99.9316 | mus_musculus_akrj | MGP_AKRJ_P0036802 | 99.8633 | 99.8633 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0036659 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 98.974 | 98.7688 | mus_spretus | MGP_SPRETEiJ_P0035858 | 98.974 | 98.7688 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 99.7264 | 99.5896 | mus_musculus_casteij | MGP_CASTEiJ_P0036545 | 99.6582 | 99.5215 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0037363 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 98.4268 | 97.264 | mus_pahari | MGP_PahariEiJ_P0040843 | 98.2924 | 97.1311 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 99.3844 | 99.2476 | mus_spicilegus | ENSMSIP00000001022 | 99.2486 | 99.112 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0036625 | 100 | 100 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 100 | 99.9316 | mus_musculus_wsbeij | MGP_WSBEiJ_P0036026 | 99.9316 | 99.8633 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 96.238 | 94.528 | rattus_norvegicus | ENSRNOP00000001979 | 95.8447 | 94.1417 |
MGP_LPJ_G0020422 | mus_musculus_lpj | MGP_LPJ_P0036794 | 99.9316 | 99.9316 | mus_musculus_pwkphj | MGP_PWKPhJ_P0036187 | 99.8633 | 99.8633 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |