| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_LPJ_G0019644 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
42715 bases |
Strand |
Plus strand |
| Position |
12 : 54103147 - 54145861 |
RNA binding domain |
SRP54 , SRP54_N |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_LPJ_P0034736 |
SRP54 |
PF00448 |
2.8e-80 |
1 |
| MGP_LPJ_P0034736 |
SRP54 |
PF00448 |
2.8e-80 |
2 |
| MGP_LPJ_P0034736 |
SRP54_N |
PF02881 |
4.6e-20 |
3 |
| MGP_LPJ_P0034738 |
SRP54 |
PF00448 |
2.8e-80 |
1 |
| MGP_LPJ_P0034738 |
SRP54 |
PF00448 |
2.8e-80 |
2 |
| MGP_LPJ_P0034738 |
SRP54_N |
PF02881 |
4.6e-20 |
3 |
| MGP_LPJ_P0034737 |
SRP54 |
PF00448 |
3e-78 |
1 |
| MGP_LPJ_P0034737 |
SRP54_N |
PF02881 |
4.3e-20 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
MGP_LPJ_T0034736 |
3157 |
461aa |
MGP_LPJ_P0034736"/note="transcript_id=MGP_LPJ_T0034736 |
| - |
MGP_LPJ_T0034737 |
2740 |
443aa |
MGP_LPJ_P0034737"/note="transcript_id=MGP_LPJ_T0034737 |
| - |
MGP_LPJ_T0034738 |
2409 |
461aa |
MGP_LPJ_P0034738"/note="transcript_id=MGP_LPJ_T0034738 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034739 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0034736 | 100 | 100 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0091402 | 23.5849 | 11.0063 | mus_musculus_lpj | MGP_LPJ_P0034736 | 32.538 | 15.1844 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_caroli | MGP_CAROLIEiJ_P0032281 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 96.0954 | 96.0954 | mus_musculus_balbcj | MGP_BALBcJ_P0034760 | 87.8968 | 87.8968 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 65.7267 | 64.2082 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0035261 | 79.3194 | 77.4869 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 65.7267 | 64.2082 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0035258 | 79.3194 | 77.4869 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 88.2863 | 88.0694 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0035265 | 86.7804 | 86.5672 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0035263 | 85.8252 | 85.6311 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus_cbaj | MGP_CBAJ_P0034452 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 83.0803 | 81.7787 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0034838 | 83.4423 | 82.1351 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 96.0954 | 96.0954 | mus_musculus_c3hhej | MGP_C3HHeJ_P0034540 | 87.8968 | 87.8968 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 96.0954 | 96.0954 | mus_musculus_c3hhej | MGP_C3HHeJ_P0034539 | 87.8968 | 87.8968 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 65.2928 | 63.7744 | mus_musculus_fvbnj | MGP_FVBNJ_P0034585 | 80.0532 | 78.1915 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 83.731 | 82.6464 | mus_musculus_fvbnj | MGP_FVBNJ_P0034584 | 85.7778 | 84.6667 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus | ENSMUSP00000151681 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 60.0868 | 55.0976 | mus_musculus_akrj | MGP_AKRJ_P0034746 | 67.561 | 61.9512 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 83.731 | 83.731 | mus_musculus_dba2j | MGP_DBA2J_P0034598 | 86.3535 | 86.3535 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 83.731 | 83.731 | mus_musculus_dba2j | MGP_DBA2J_P0034596 | 86.3535 | 86.3535 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 70.4989 | 70.0651 | mus_spretus | MGP_SPRETEiJ_P0033771 | 97.3054 | 96.7066 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus_casteij | MGP_CASTEiJ_P0034464 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0035303 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_pahari | MGP_PahariEiJ_P0082395 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.4447 | mus_spicilegus | ENSMSIP00000016143 | 79.6396 | 79.2793 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034596 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034597 | 87.6984 | 87.5 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 86.3341 | 84.5987 | mus_musculus_wsbeij | MGP_WSBEiJ_P0034003 | 85.0427 | 83.3333 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.4447 | rattus_norvegicus | ENSRNOP00000048945 | 87.6984 | 87.3016 |
| MGP_LPJ_G0019644 | mus_musculus_lpj | MGP_LPJ_P0034736 | 95.8785 | 95.6616 | mus_musculus_pwkphj | MGP_PWKPhJ_P0034145 | 87.6984 | 87.5 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
