Description

Ensembl ID MGP_LPJ_G0018013 Gene ID Accession -
Symbol Pnpt1 Alias - Full Name polyribonucleotide nucleotidyltransferase 1
Status Confidence Length 33155 bases Strand Plus strand
Position 11 : 27377443 - 27410597 RNA binding domain RNase_PH , RNase_PH_C , PNPase , KH_1 , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0028252 RNase_PH PF01138 2.9e-38 1
MGP_LPJ_P0028252 RNase_PH PF01138 2.9e-38 2
MGP_LPJ_P0028252 RNase_PH_C PF03725 2e-16 3
MGP_LPJ_P0028252 PNPase PF03726 5.6e-07 4
MGP_LPJ_P0028252 KH_1 PF00013 4.5e-07 5
MGP_LPJ_P0028252 S1 PF00575 1.3e-05 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pnpt1-002 MGP_LPJ_T0028250 3325 No protein -
- MGP_LPJ_T0028251 459 No protein -
- MGP_LPJ_T0028252 2707 783aa MGP_LPJ_P0028252"/note="transcript_id=MGP_LPJ_T0028252
- MGP_LPJ_T0028253 587 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0018013

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.489198.9783mus_caroliMGP_CAROLIEiJ_P002595999.362298.852
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_balbcjMGP_BALBcJ_P0028281100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.872399.8723mus_musculus_ajMGP_AJ_P002830399.872399.8723
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0028781100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_cbajMGP_CBAJ_P0028006100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0028338100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.872399.8723mus_musculus_c3hhejMGP_C3HHeJ_P002808499.872399.8723
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_fvbnjMGP_FVBNJ_P0028123100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculusENSMUSP00000020756100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_akrjMGP_AKRJ_P0028266100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825297.190397.1903mus_musculus_dba2jMGP_DBA2J_P002813797.190397.1903
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.616999.3614mus_spretusMGP_SPRETEiJ_P002729699.489899.2347
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.872399.8723mus_musculus_casteijMGP_CASTEiJ_P002771899.872399.8723
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.872399.8723mus_musculus_nzohlltjMGP_NZOHlLtJ_P002881599.872399.8723
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.10697.7011mus_pahariMGP_PahariEiJ_P002999398.979697.5765
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825299.744699.6169mus_spicilegusENSMSIP0000002085699.617399.4898
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0028109100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P0028252100100mus_musculus_wsbeijMGP_WSBEiJ_P0027592100100
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825298.21296.1686rattus_norvegicusENSRNOP0000000491998.086796.0459
MGP_LPJ_G0018013mus_musculus_lpjMGP_LPJ_P002825297.573497.1903mus_musculus_pwkphjMGP_PWKPhJ_P002742698.453698.067

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression