Description

Ensembl ID MGP_LPJ_G0017897 Gene ID Accession -
Symbol Zmat5 Alias - Full Name zinc finger, matrin type 5
Status Confidence Length 39348 bases Strand Plus strand
Position 11 : 1772839 - 1812186 RNA binding domain zf-CCCH , zf-U1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0027742 zf-CCCH PF00642 8.4e-08 1
MGP_LPJ_P0027742 zf-U1 PF06220 5.2e-07 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Zmat5-001 MGP_LPJ_T0027742 792 170aa MGP_LPJ_P0027742"/note="transcript_id=MGP_LPJ_T0027742
- MGP_LPJ_T0027743 599 No protein -
- MGP_LPJ_T0027744 601 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0017897

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P002774299.411898.8235mus_caroliMGP_CAROLIEiJ_P002544699.411898.8235
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_balbcjMGP_BALBcJ_P0027772100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_ajMGP_AJ_P0027793100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0028274100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_cbajMGP_CBAJ_P0027499100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0027824100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_c3hhejMGP_C3HHeJ_P0027570100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_fvbnjMGP_FVBNJ_P0027610100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculusENSMUSP00000009220100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_akrjMGP_AKRJ_P0027754100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_dba2jMGP_DBA2J_P0027628100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P002774299.411899.4118mus_spretusMGP_SPRETEiJ_P002677299.411899.4118
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P002774299.411899.4118mus_musculus_casteijMGP_CASTEiJ_P002716499.411899.4118
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0028298100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P002774299.411897.6471mus_pahariMGP_PahariEiJ_P003050199.411897.6471
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_spicilegusENSMSIP00000019932100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0027594100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_wsbeijMGP_WSBEiJ_P0027081100100
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P002774298.823598.2353rattus_norvegicusENSRNOP0000001033298.823598.2353
MGP_LPJ_G0017897mus_musculus_lpjMGP_LPJ_P0027742100100mus_musculus_pwkphjMGP_PWKPhJ_P0026854100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression