RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_LPJ_G0017897 | Gene ID |
|
Accession |
- |
Symbol |
Zmat5 |
Alias |
- |
Full Name |
zinc finger, matrin type 5 |
Status |
Confidence |
Length |
39348 bases |
Strand |
Plus strand |
Position |
11 : 1772839 - 1812186 |
RNA binding domain |
zf-CCCH , zf-U1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_LPJ_P0027742 |
zf-CCCH |
PF00642 |
8.4e-08 |
1 |
MGP_LPJ_P0027742 |
zf-U1 |
PF06220 |
5.2e-07 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Zmat5-001 |
MGP_LPJ_T0027742 |
792 |
170aa |
MGP_LPJ_P0027742"/note="transcript_id=MGP_LPJ_T0027742 |
- |
MGP_LPJ_T0027743 |
599 |
No protein |
- |
- |
MGP_LPJ_T0027744 |
601 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0017897 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 99.4118 | 98.8235 | mus_caroli | MGP_CAROLIEiJ_P0025446 | 99.4118 | 98.8235 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0027772 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0027793 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0028274 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0027499 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0027824 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027570 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0027610 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus | ENSMUSP00000009220 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0027754 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0027628 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 99.4118 | 99.4118 | mus_spretus | MGP_SPRETEiJ_P0026772 | 99.4118 | 99.4118 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 99.4118 | 99.4118 | mus_musculus_casteij | MGP_CASTEiJ_P0027164 | 99.4118 | 99.4118 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0028298 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 99.4118 | 97.6471 | mus_pahari | MGP_PahariEiJ_P0030501 | 99.4118 | 97.6471 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_spicilegus | ENSMSIP00000019932 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0027594 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0027081 | 100 | 100 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 98.8235 | 98.2353 | rattus_norvegicus | ENSRNOP00000010332 | 98.8235 | 98.2353 |
MGP_LPJ_G0017897 | mus_musculus_lpj | MGP_LPJ_P0027742 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026854 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |