Description

Ensembl ID MGP_LPJ_G0017506 Gene ID Accession -
Symbol Polr3b Alias - Full Name polymerase (RNA) III (DNA directed) polypeptide B
Status Confidence Length 105791 bases Strand Plus strand
Position 10 : 86136331 - 86242121 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0026552 RNA_pol_Rpb2_1 PF04563 9.1e-54 1
MGP_LPJ_P0026552 RNA_pol_Rpb2_3 PF04565 4.9e-20 2
MGP_LPJ_P0026552 RNA_pol_Rpb2_7 PF04560 1.6e-34 3
MGP_LPJ_P0026552 RNA_pol_Rpb2_2 PF04561 3.3e-27 4
MGP_LPJ_P0026552 RNA_pol_Rpb2_6 PF00562 4.1e-127 5
MGP_LPJ_P0026552 RNA_pol_Rpb2_4 PF04566 2.5e-26 6
MGP_LPJ_P0026552 RNA_pol_Rpb2_5 PF04567 5.3e-07 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Polr3b-201 MGP_LPJ_T0026552 4823 1133aa MGP_LPJ_P0026552"/note="transcript_id=MGP_LPJ_T0026552

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P007209758.432737.6491mus_musculus_lpjMGP_LPJ_P002655260.547239.0115
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P005744647.312831.1013mus_musculus_lpjMGP_LPJ_P002655247.396331.1562

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P002655299.911799.9117mus_caroliMGP_CAROLIEiJ_P002431199.911799.9117
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_balbcjMGP_BALBcJ_P0026586100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_ajMGP_AJ_P0026609100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0027088100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_cbajMGP_CBAJ_P0026316100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0026641100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_c3hhejMGP_C3HHeJ_P0026387100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_fvbnjMGP_FVBNJ_P0026436100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculusENSMUSP00000076418100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_akrjMGP_AKRJ_P0026578100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_dba2jMGP_DBA2J_P0026440100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P002655299.911799.9117mus_spretusMGP_SPRETEiJ_P002549399.911799.9117
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_casteijMGP_CASTEiJ_P0025966100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P002655299.911799.9117mus_musculus_nzohlltjMGP_NZOHlLtJ_P002711699.911799.9117
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P002655295.233994.9691mus_pahariMGP_PahariEiJ_P008835299.538799.262
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P002655299.911799.9117mus_spicilegusENSMSIP0000003591599.911799.9117
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0026434100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_wsbeijMGP_WSBEiJ_P0025914100100
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P002655299.911799.8235rattus_norvegicusENSRNOP0000000974699.911799.8235
MGP_LPJ_G0017506mus_musculus_lpjMGP_LPJ_P0026552100100mus_musculus_pwkphjMGP_PWKPhJ_P0025672100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression