Description

Ensembl ID MGP_LPJ_G0016933 Gene ID Accession -
Symbol Sf3b5 Alias - Full Name splicing factor 3b, subunit 5
Status Confidence Length 3837 bases Strand Plus strand
Position 10 : 10250038 - 10253874 RNA binding domain SF3b10
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_LPJ_P0024503 SF3b10 PF07189 1.3e-38 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sf3b5-001 MGP_LPJ_T0024503 3837 86aa MGP_LPJ_P0024503"/note="transcript_id=MGP_LPJ_T0024503

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0016933

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_caroliMGP_CAROLIEiJ_P0022287100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_balbcjMGP_BALBcJ_P0024524100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_ajMGP_AJ_P0024554100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0025033100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_cbajMGP_CBAJ_P0024263100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0024588100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_c3hhejMGP_C3HHeJ_P0024334100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_fvbnjMGP_FVBNJ_P0024387100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculusENSMUSP00000100771100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_akrjMGP_AKRJ_P0024523100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_dba2jMGP_DBA2J_P0024387100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_spretusMGP_SPRETEiJ_P0023391100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_casteijMGP_CASTEiJ_P0023876100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0025073100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_pahariMGP_PahariEiJ_P0056357100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_spicilegusENSMSIP00000018195100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0024376100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_wsbeijMGP_WSBEiJ_P0023890100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100rattus_norvegicusENSRNOP00000019994100100
MGP_LPJ_G0016933mus_musculus_lpjMGP_LPJ_P0024503100100mus_musculus_pwkphjMGP_PWKPhJ_P0023588100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression