RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MGP_FVBNJ_G0034783	Gene ID		Accession	-
Symbol	Gm20509	Alias	-	Full Name	predicted gene 20509
Status	Confidence	Length	15366 bases	Strand	Plus strand
Position	9 : 69777349 - 69792714	RNA binding domain	Ribosomal_L24e , MOEP19
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_FVBNJ_P0092759	Ribosomal_L24e	PF01246	2.8e-15	1
MGP_FVBNJ_P0092759	MOEP19	PF16005	1.9e-32	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Gm20509-001	MGP_FVBNJ_T0092759	1016	325aa	MGP_FVBNJ_P0092759"/note="transcript_id=MGP_FVBNJ_T0092759

Gene Model

Click here to download MGP_FVBNJ_G0034783's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_FVBNJ_G0034783's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_FVBNJ_G0034783

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_FVBNJ_G0034783

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression