Description

Ensembl ID MGP_FVBNJ_G0033909 Gene ID Accession -
Symbol Kars Alias - Full Name lysyl-tRNA synthetase
Status Confidence Length 18982 bases Strand Minus strand
Position 8 : 108400143 - 108419124 RNA binding domain tRNA_anti-codon , tRNA-synt_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0090102 tRNA_anti-codon PF01336 9e-15 1
MGP_FVBNJ_P0090102 tRNA-synt_2 PF00152 2.4e-80 2
MGP_FVBNJ_P0090101 tRNA_anti-codon PF01336 1e-14 1
MGP_FVBNJ_P0090101 tRNA-synt_2 PF00152 2.8e-80 2
MGP_FVBNJ_P0090103 tRNA_anti-codon PF01336 1e-14 1
MGP_FVBNJ_P0090103 tRNA-synt_2 PF00152 2.8e-80 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Kars-001 MGP_FVBNJ_T0090101 2156 624aa MGP_FVBNJ_P0090101"/note="transcript_id=MGP_FVBNJ_T0090101
- MGP_FVBNJ_T0090102 2007 595aa MGP_FVBNJ_P0090102"/note="transcript_id=MGP_FVBNJ_T0090102
- MGP_FVBNJ_T0090103 2188 624aa MGP_FVBNJ_P0090103"/note="transcript_id=MGP_FVBNJ_T0090103

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P002172741.716623.3533mus_musculus_fvbnjMGP_FVBNJ_P009010333.493618.75
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P004956137.030419.1413mus_musculus_fvbnjMGP_FVBNJ_P009010333.173117.1474
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P002279734.150119.1424mus_musculus_fvbnjMGP_FVBNJ_P009010335.737220.0321
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P008459335.849118.239mus_musculus_fvbnjMGP_FVBNJ_P009010327.403813.9423

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010381.570581.5705mus_caroliMGP_CAROLIEiJ_P0086107100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0090548100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_ajMGP_AJ_P0090628100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010399.839799.8397mus_musculus_balbcjMGP_BALBcJ_P009055399.839799.8397
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0091075100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_dba2jMGP_DBA2J_P0090269100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_cbajMGP_CBAJ_P0090059100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_c3hhejMGP_C3HHeJ_P0090130100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_lpjMGP_LPJ_P0090300100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010399.839799.8397mus_spretusMGP_SPRETEiJ_P008961499.839799.8397
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0091392100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculusENSMUSP00000126268100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010371.794969.8718mus_musculus_pwkphjMGP_PWKPhJ_P009011471.794969.8718
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010393.589791.9872mus_pahariMGP_PahariEiJ_P005435898.151396.4706
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010395.993695.5128mus_spicilegusENSMSIP0000002362794.330793.8583
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010394.230893.2692mus_musculus_casteijMGP_CASTEiJ_P009068098.823597.8151
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0090133100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010398.557798.5577mus_musculus_wsbeijMGP_WSBEiJ_P008916898.557798.5577
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P0090103100100mus_musculus_akrjMGP_AKRJ_P0090567100100
MGP_FVBNJ_G0033909mus_musculus_fvbnjMGP_FVBNJ_P009010398.878296.7949rattus_norvegicusENSRNOP0000004445498.562396.4856

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression