RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0033284 | Gene ID |
|
Accession |
- |
Symbol |
Wrn |
Alias |
- |
Full Name |
Werner syndrome homolog (human) |
Status |
Confidence |
Length |
142094 bases |
Strand |
Minus strand |
Position |
8 : 30122931 - 30265024 |
RNA binding domain |
DEAD , DNA_pol_A_exo1 , HRDC |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0088136 |
DEAD |
PF00270 |
2e-15 |
1 |
MGP_FVBNJ_P0088136 |
DNA_pol_A_exo1 |
PF01612 |
3.5e-36 |
2 |
MGP_FVBNJ_P0088136 |
HRDC |
PF00570 |
3.9e-13 |
3 |
MGP_FVBNJ_P0088137 |
DEAD |
PF00270 |
2e-15 |
1 |
MGP_FVBNJ_P0088137 |
DNA_pol_A_exo1 |
PF01612 |
3.5e-36 |
2 |
MGP_FVBNJ_P0088137 |
HRDC |
PF00570 |
3.9e-13 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Wrn-001 |
MGP_FVBNJ_T0088136 |
6338 |
1401aa |
MGP_FVBNJ_P0088136"/note="transcript_id=MGP_FVBNJ_T0088136 |
- |
MGP_FVBNJ_T0088137 |
6228 |
1401aa |
MGP_FVBNJ_P0088137"/note="transcript_id=MGP_FVBNJ_T0088137 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0041227 | 33.9638 | 17.7632 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 29.4789 | 15.4176 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0080472 | 47.8395 | 28.0864 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 22.1271 | 12.9907 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0033325 | 34.0122 | 18.9409 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 23.8401 | 13.2762 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0084282 | 36.9979 | 21.1416 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 37.4732 | 21.4133 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 98.5011 | 97.4304 | mus_caroli | MGP_CAROLIEiJ_P0084137 | 98.5011 | 97.4304 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 91.7202 | 89.793 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0088553 | 92.0487 | 90.1146 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0088641 | 100 | 100 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0088586 | 100 | 100 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.429 | 99.1435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089102 | 99.429 | 99.1435 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 97.9301 | 97.8587 | mus_musculus_dba2j | MGP_DBA2J_P0088295 | 100 | 99.9271 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0088100 | 100 | 100 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 92.0057 | 90.5068 | mus_musculus_c3hhej | MGP_C3HHeJ_P0088149 | 92.4014 | 90.8961 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.7145 | 99.6431 | mus_musculus_lpj | MGP_LPJ_P0088324 | 99.7145 | 99.6431 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.429 | 98.7866 | mus_spretus | MGP_SPRETEiJ_P0087611 | 99.429 | 98.7866 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.429 | 99.1435 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0089392 | 99.429 | 99.1435 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.429 | 99.1435 | mus_musculus | ENSMUSP00000033991 | 99.429 | 99.1435 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.5717 | 99.3576 | mus_musculus_pwkphj | MGP_PWKPhJ_P0088101 | 99.5717 | 99.3576 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 96.217 | 93.6474 | mus_pahari | MGP_PahariEiJ_P0047036 | 96.217 | 93.6474 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.2148 | 98.5011 | mus_spicilegus | ENSMSIP00000031480 | 99.2148 | 98.5011 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.3576 | 99.0007 | mus_musculus_casteij | MGP_CASTEiJ_P0088684 | 99.3576 | 99.0007 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0088171 | 100 | 100 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 99.8572 | 99.8572 | mus_musculus_wsbeij | MGP_WSBEiJ_P0087189 | 99.8572 | 99.8572 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0088567 | 100 | 100 |
MGP_FVBNJ_G0033284 | mus_musculus_fvbnj | MGP_FVBNJ_P0088136 | 92.2198 | 86.6524 | rattus_norvegicus | ENSRNOP00000055596 | 92.2857 | 86.7143 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |