Description

Ensembl ID MGP_FVBNJ_G0033284 Gene ID Accession -
Symbol Wrn Alias - Full Name Werner syndrome homolog (human)
Status Confidence Length 142094 bases Strand Minus strand
Position 8 : 30122931 - 30265024 RNA binding domain DEAD , DNA_pol_A_exo1 , HRDC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0088136 DEAD PF00270 2e-15 1
MGP_FVBNJ_P0088136 DNA_pol_A_exo1 PF01612 3.5e-36 2
MGP_FVBNJ_P0088136 HRDC PF00570 3.9e-13 3
MGP_FVBNJ_P0088137 DEAD PF00270 2e-15 1
MGP_FVBNJ_P0088137 DNA_pol_A_exo1 PF01612 3.5e-36 2
MGP_FVBNJ_P0088137 HRDC PF00570 3.9e-13 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Wrn-001 MGP_FVBNJ_T0088136 6338 1401aa MGP_FVBNJ_P0088136"/note="transcript_id=MGP_FVBNJ_T0088136
- MGP_FVBNJ_T0088137 6228 1401aa MGP_FVBNJ_P0088137"/note="transcript_id=MGP_FVBNJ_T0088137

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P004122733.963817.7632mus_musculus_fvbnjMGP_FVBNJ_P008813629.478915.4176
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008047247.839528.0864mus_musculus_fvbnjMGP_FVBNJ_P008813622.127112.9907
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P003332534.012218.9409mus_musculus_fvbnjMGP_FVBNJ_P008813623.840113.2762
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008428236.997921.1416mus_musculus_fvbnjMGP_FVBNJ_P008813637.473221.4133

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813698.501197.4304mus_caroliMGP_CAROLIEiJ_P008413798.501197.4304
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813691.720289.793mus_musculus_129s1svimjMGP_129S1SvImJ_P008855392.048790.1146
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P0088136100100mus_musculus_ajMGP_AJ_P0088641100100
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P0088136100100mus_musculus_balbcjMGP_BALBcJ_P0088586100100
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.42999.1435mus_musculus_c57bl6njMGP_C57BL6NJ_P008910299.42999.1435
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813697.930197.8587mus_musculus_dba2jMGP_DBA2J_P008829510099.9271
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P0088136100100mus_musculus_cbajMGP_CBAJ_P0088100100100
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813692.005790.5068mus_musculus_c3hhejMGP_C3HHeJ_P008814992.401490.8961
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.714599.6431mus_musculus_lpjMGP_LPJ_P008832499.714599.6431
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.42998.7866mus_spretusMGP_SPRETEiJ_P008761199.42998.7866
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.42999.1435mus_musculus_nzohlltjMGP_NZOHlLtJ_P008939299.42999.1435
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.42999.1435mus_musculusENSMUSP0000003399199.42999.1435
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.571799.3576mus_musculus_pwkphjMGP_PWKPhJ_P008810199.571799.3576
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813696.21793.6474mus_pahariMGP_PahariEiJ_P004703696.21793.6474
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.214898.5011mus_spicilegusENSMSIP0000003148099.214898.5011
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.357699.0007mus_musculus_casteijMGP_CASTEiJ_P008868499.357699.0007
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P0088136100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0088171100100
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813699.857299.8572mus_musculus_wsbeijMGP_WSBEiJ_P008718999.857299.8572
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P0088136100100mus_musculus_akrjMGP_AKRJ_P0088567100100
MGP_FVBNJ_G0033284mus_musculus_fvbnjMGP_FVBNJ_P008813692.219886.6524rattus_norvegicusENSRNOP0000005559692.285786.7143

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression