RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0032666 | Gene ID |
|
Accession |
- |
Symbol |
Rps13 |
Alias |
- |
Full Name |
ribosomal protein S13 |
Status |
Confidence |
Length |
2705 bases |
Strand |
Minus strand |
Position |
7 : 114956250 - 114958954 |
RNA binding domain |
Ribosomal_S13_N , Ribosomal_S15 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0085632 |
Ribosomal_S13_N |
PF08069 |
7.9e-31 |
1 |
MGP_FVBNJ_P0085632 |
Ribosomal_S15 |
PF00312 |
3.6e-12 |
2 |
MGP_FVBNJ_P0085631 |
Ribosomal_S13_N |
PF08069 |
9e-31 |
1 |
MGP_FVBNJ_P0085631 |
Ribosomal_S15 |
PF00312 |
2.5e-13 |
2 |
MGP_FVBNJ_P0085636 |
Ribosomal_S13_N |
PF08069 |
1.2e-24 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rps13-001 |
MGP_FVBNJ_T0085631 |
589 |
151aa |
MGP_FVBNJ_P0085631"/note="transcript_id=MGP_FVBNJ_T0085631 |
- |
MGP_FVBNJ_T0085632 |
1202 |
140aa |
MGP_FVBNJ_P0085632"/note="transcript_id=MGP_FVBNJ_T0085632 |
- |
MGP_FVBNJ_T0085633 |
428 |
No protein |
- |
- |
MGP_FVBNJ_T0085634 |
653 |
No protein |
- |
- |
MGP_FVBNJ_T0085635 |
2248 |
No protein |
- |
- |
MGP_FVBNJ_T0085636 |
1150 |
53aa |
MGP_FVBNJ_P0085636"/note="transcript_id=MGP_FVBNJ_T0085636 |
- |
MGP_FVBNJ_T0085637 |
1926 |
No protein |
- |
- |
MGP_FVBNJ_T0085638 |
958 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0032666 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0081715 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0086046 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0086128 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0086091 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0086587 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0085787 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0085591 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0085652 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0085828 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0085106 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0086880 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus | ENSMUSP00000126294 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 99.3377 | 99.3377 | mus_musculus_pwkphj | MGP_PWKPhJ_P0085580 | 99.3377 | 99.3377 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0018519 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_spicilegus | ENSMSIP00000006057 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0086170 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0085672 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0084695 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0086066 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 100 | 100 | rattus_norvegicus | ENSRNOP00000095846 | 100 | 100 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 98.0132 | 98.0132 | rattus_norvegicus | ENSRNOP00000067470 | 95.4839 | 95.4839 |
MGP_FVBNJ_G0032666 | mus_musculus_fvbnj | MGP_FVBNJ_P0085631 | 96.0265 | 96.0265 | rattus_norvegicus | ENSRNOP00000089647 | 81.9209 | 81.9209 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |