Description

Ensembl ID MGP_FVBNJ_G0032288 Gene ID Accession -
Symbol Pcf11 Alias - Full Name PCF11 cleavage and polyadenylation factor subunit
Status Confidence Length 26203 bases Strand Minus strand
Position 7 : 91088131 - 91114333 RNA binding domain CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0084573 CID PF04818 1.6e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pcf11-001 MGP_FVBNJ_T0084573 5825 1553aa MGP_FVBNJ_P0084573"/note="transcript_id=MGP_FVBNJ_T0084573
- MGP_FVBNJ_T0084574 4731 1475aa MGP_FVBNJ_P0084574"/note="transcript_id=MGP_FVBNJ_T0084574
- MGP_FVBNJ_T0084575 534 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0032288

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.484999.1629mus_caroliMGP_CAROLIEiJ_P008067199.484999.1629
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P0084573100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0084978100100
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457310099.9356mus_musculus_ajMGP_AJ_P008504510099.9356
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457310099.9356mus_musculus_balbcjMGP_BALBcJ_P008501710099.9356
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P0084573100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0085522100100
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.871299.8712mus_musculus_dba2jMGP_DBA2J_P008471699.871299.8712
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.291799.2917mus_musculus_cbajMGP_CBAJ_P008452599.291799.2917
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.871299.8712mus_musculus_c3hhejMGP_C3HHeJ_P008458899.871299.8712
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.871299.8712mus_musculus_lpjMGP_LPJ_P008474799.871299.8712
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.935699.8712mus_spretusMGP_SPRETEiJ_P008403699.935699.8712
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.871299.8712mus_musculus_nzohlltjMGP_NZOHlLtJ_P008580299.871299.8712
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P0084573100100mus_musculusENSMUSP00000113717100100
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.935699.9356mus_musculus_pwkphjMGP_PWKPhJ_P008453099.935699.9356
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.356198.9697mus_pahariMGP_PahariEiJ_P001751299.356198.9697
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.742499.6136mus_spicilegusENSMSIP0000002197899.742499.6136
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P0084573100100mus_musculus_casteijMGP_CASTEiJ_P0085101100100
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457383.966583.8377mus_musculus_nodshiltjMGP_NODShiLtJ_P008461890.871190.7317
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.871299.8712mus_musculus_wsbeijMGP_WSBEiJ_P008363999.871299.8712
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457310099.9356mus_musculus_akrjMGP_AKRJ_P008499410099.9356
MGP_FVBNJ_G0032288mus_musculus_fvbnjMGP_FVBNJ_P008457399.162998.197rattus_norvegicusENSRNOP0000009247082.485381.6818

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression