RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_FVBNJ_G0029785	Gene ID		Accession	-
Symbol	Oas1f	Alias	-	Full Name	2'-5' oligoadenylate synthetase 1F
Status	Confidence	Length	12749 bases	Strand	Plus strand
Position	5 : 118144347 - 118157095	RNA binding domain	OAS1_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_FVBNJ_P0073576	OAS1_C	PF10421	2.9e-81	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Oas1f-001	MGP_FVBNJ_T0073576	1476	364aa	MGP_FVBNJ_P0073576"/note="transcript_id=MGP_FVBNJ_T0073576
-	MGP_FVBNJ_T0073577	748	29aa	MGP_FVBNJ_P0073577"/note="transcript_id=MGP_FVBNJ_T0073577

Gene Model

Click here to download MGP_FVBNJ_G0029785's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_FVBNJ_G0029785's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_FVBNJ_G0029785

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_FVBNJ_G0029785

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression