| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_FVBNJ_G0028903 | Gene ID |
|
Accession |
- |
| Symbol |
Exosc10 |
Alias |
- |
Full Name |
exosome component 10 |
| Status |
Confidence |
Length |
24908 bases |
Strand |
Plus strand |
| Position |
4 : 145189152 - 145214059 |
RNA binding domain |
DNA_pol_A_exo1 , PMC2NT , HRDC |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_FVBNJ_P0068876 |
DNA_pol_A_exo1 |
PF01612 |
6.8e-49 |
1 |
| MGP_FVBNJ_P0068876 |
PMC2NT |
PF08066 |
6.9e-22 |
2 |
| MGP_FVBNJ_P0068876 |
HRDC |
PF00570 |
1.6e-13 |
3 |
| MGP_FVBNJ_P0068877 |
DNA_pol_A_exo1 |
PF01612 |
1.2e-48 |
1 |
| MGP_FVBNJ_P0068877 |
PMC2NT |
PF08066 |
1.1e-21 |
2 |
| MGP_FVBNJ_P0068877 |
HRDC |
PF00570 |
2.9e-14 |
3 |
| MGP_FVBNJ_P0068874 |
DNA_pol_A_exo1 |
PF01612 |
1.2e-48 |
1 |
| MGP_FVBNJ_P0068874 |
PMC2NT |
PF08066 |
1.1e-21 |
2 |
| MGP_FVBNJ_P0068874 |
HRDC |
PF00570 |
3.1e-14 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Exosc10-001 |
MGP_FVBNJ_T0068874 |
2790 |
887aa |
MGP_FVBNJ_P0068874"/note="transcript_id=MGP_FVBNJ_T0068874 |
| - |
MGP_FVBNJ_T0068875 |
2773 |
No protein |
- |
| - |
MGP_FVBNJ_T0068876 |
2816 |
618aa |
MGP_FVBNJ_P0068876"/note="transcript_id=MGP_FVBNJ_T0068876 |
| - |
MGP_FVBNJ_T0068877 |
2682 |
862aa |
MGP_FVBNJ_P0068877"/note="transcript_id=MGP_FVBNJ_T0068877 |
| - |
MGP_FVBNJ_T0068878 |
306 |
30aa |
MGP_FVBNJ_P0068878"/note="transcript_id=MGP_FVBNJ_T0068878 |
| - |
MGP_FVBNJ_T0068879 |
1188 |
No protein |
- |
| - |
MGP_FVBNJ_T0068880 |
1195 |
No protein |
- |
| - |
MGP_FVBNJ_T0068881 |
401 |
No protein |
- |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0056607 | 39.2982 | 24.5614 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 25.2537 | 15.7835 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 98.8726 | 98.5344 | mus_caroli | MGP_CAROLIEiJ_P0065787 | 98.8726 | 98.5344 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0069248 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_aj | MGP_AJ_P0069312 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_balbcj | MGP_BALBcJ_P0069229 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0069725 | 100 | 100 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_dba2j | MGP_DBA2J_P0068974 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_cbaj | MGP_CBAJ_P0068838 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_c3hhej | MGP_C3HHeJ_P0068898 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_lpj | MGP_LPJ_P0069060 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.4363 | 99.4363 | mus_spretus | MGP_SPRETEiJ_P0068364 | 99.4363 | 99.4363 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0069909 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 100 | 100 | mus_musculus | ENSMUSP00000017408 | 100 | 100 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_pwkphj | MGP_PWKPhJ_P0068859 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 98.1962 | 97.1815 | mus_pahari | MGP_PahariEiJ_P0080895 | 98.1962 | 97.1815 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.6618 | 99.549 | mus_spicilegus | ENSMSIP00000013727 | 99.6618 | 99.549 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_casteij | MGP_CASTEiJ_P0069363 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0068891 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_wsbeij | MGP_WSBEiJ_P0068062 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 99.8873 | 99.7745 | mus_musculus_akrj | MGP_AKRJ_P0069217 | 99.8873 | 99.7745 |
| MGP_FVBNJ_G0028903 | mus_musculus_fvbnj | MGP_FVBNJ_P0068874 | 96.956 | 95.2649 | rattus_norvegicus | ENSRNOP00000014629 | 97.1751 | 95.4802 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |