Description

Ensembl ID MGP_FVBNJ_G0028903 Gene ID Accession -
Symbol Exosc10 Alias - Full Name exosome component 10
Status Confidence Length 24908 bases Strand Plus strand
Position 4 : 145189152 - 145214059 RNA binding domain DNA_pol_A_exo1 , PMC2NT , HRDC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0068876 DNA_pol_A_exo1 PF01612 6.8e-49 1
MGP_FVBNJ_P0068876 PMC2NT PF08066 6.9e-22 2
MGP_FVBNJ_P0068876 HRDC PF00570 1.6e-13 3
MGP_FVBNJ_P0068877 DNA_pol_A_exo1 PF01612 1.2e-48 1
MGP_FVBNJ_P0068877 PMC2NT PF08066 1.1e-21 2
MGP_FVBNJ_P0068877 HRDC PF00570 2.9e-14 3
MGP_FVBNJ_P0068874 DNA_pol_A_exo1 PF01612 1.2e-48 1
MGP_FVBNJ_P0068874 PMC2NT PF08066 1.1e-21 2
MGP_FVBNJ_P0068874 HRDC PF00570 3.1e-14 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Exosc10-001 MGP_FVBNJ_T0068874 2790 887aa MGP_FVBNJ_P0068874"/note="transcript_id=MGP_FVBNJ_T0068874
- MGP_FVBNJ_T0068875 2773 No protein -
- MGP_FVBNJ_T0068876 2816 618aa MGP_FVBNJ_P0068876"/note="transcript_id=MGP_FVBNJ_T0068876
- MGP_FVBNJ_T0068877 2682 862aa MGP_FVBNJ_P0068877"/note="transcript_id=MGP_FVBNJ_T0068877
- MGP_FVBNJ_T0068878 306 30aa MGP_FVBNJ_P0068878"/note="transcript_id=MGP_FVBNJ_T0068878
- MGP_FVBNJ_T0068879 1188 No protein -
- MGP_FVBNJ_T0068880 1195 No protein -
- MGP_FVBNJ_T0068881 401 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P005660739.298224.5614mus_musculus_fvbnjMGP_FVBNJ_P006887425.253715.7835

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887498.872698.5344mus_caroliMGP_CAROLIEiJ_P006578798.872698.5344
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_129s1svimjMGP_129S1SvImJ_P006924899.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_ajMGP_AJ_P006931299.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_balbcjMGP_BALBcJ_P006922999.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P0068874100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0069725100100
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_dba2jMGP_DBA2J_P006897499.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_cbajMGP_CBAJ_P006883899.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_c3hhejMGP_C3HHeJ_P006889899.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_lpjMGP_LPJ_P006906099.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.436399.4363mus_spretusMGP_SPRETEiJ_P006836499.436399.4363
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_nzohlltjMGP_NZOHlLtJ_P006990999.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P0068874100100mus_musculusENSMUSP00000017408100100
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_pwkphjMGP_PWKPhJ_P006885999.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887498.196297.1815mus_pahariMGP_PahariEiJ_P008089598.196297.1815
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.661899.549mus_spicilegusENSMSIP0000001372799.661899.549
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_casteijMGP_CASTEiJ_P006936399.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_nodshiltjMGP_NODShiLtJ_P006889199.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_wsbeijMGP_WSBEiJ_P006806299.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887499.887399.7745mus_musculus_akrjMGP_AKRJ_P006921799.887399.7745
MGP_FVBNJ_G0028903mus_musculus_fvbnjMGP_FVBNJ_P006887496.95695.2649rattus_norvegicusENSRNOP0000001462997.175195.4802

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression