Description

Ensembl ID MGP_FVBNJ_G0028594 Gene ID Accession -
Symbol Yars Alias - Full Name tyrosyl-tRNA synthetase
Status Confidence Length 34075 bases Strand Plus strand
Position 4 : 125046789 - 125080863 RNA binding domain tRNA_bind , tRNA-synt_1b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0067611 tRNA_bind PF01588 9e-33 1
MGP_FVBNJ_P0067611 tRNA-synt_1b PF00579 1.3e-75 2
MGP_FVBNJ_P0067613 tRNA-synt_1b PF00579 1.2e-11 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Yars-001 MGP_FVBNJ_T0067611 2908 564aa MGP_FVBNJ_P0067611"/note="transcript_id=MGP_FVBNJ_T0067611
- MGP_FVBNJ_T0067612 647 No protein -
- MGP_FVBNJ_T0067613 700 83aa MGP_FVBNJ_P0067613"/note="transcript_id=MGP_FVBNJ_T0067613
- MGP_FVBNJ_T0067614 527 No protein -
- MGP_FVBNJ_T0067615 610 No protein -
- MGP_FVBNJ_T0067616 2443 No protein -
- MGP_FVBNJ_T0067617 921 No protein -
- MGP_FVBNJ_T0067618 602 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0028594

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P006761199.822799.2908mus_caroliMGP_CAROLIEiJ_P006457399.822799.2908
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0067967100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_ajMGP_AJ_P0068027100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_balbcjMGP_BALBcJ_P0067948100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0068437100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_dba2jMGP_DBA2J_P0067699100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_cbajMGP_CBAJ_P0067562100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_c3hhejMGP_C3HHeJ_P0067619100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_lpjMGP_LPJ_P0067789100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P006761110099.6454mus_spretusMGP_SPRETEiJ_P006708910099.6454
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0068617100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P006761193.61793.617mus_musculusENSMUSP00000101669100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P006761199.822799.8227mus_musculus_pwkphjMGP_PWKPhJ_P006755999.822799.8227
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P006761199.468198.4043mus_pahariMGP_PahariEiJ_P007966699.468198.4043
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P006761199.822799.6454mus_spicilegusENSMSIP0000000239799.822799.6454
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_casteijMGP_CASTEiJ_P0068043100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0067609100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P0067611100100mus_musculus_akrjMGP_AKRJ_P0067935100100
MGP_FVBNJ_G0028594mus_musculus_fvbnjMGP_FVBNJ_P006761193.085191.844rattus_norvegicusENSRNOP0000001067498.684297.3684

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression