Description

Ensembl ID MGP_FVBNJ_G0027385 Gene ID Accession -
Symbol Rprd2 Alias - Full Name regulation of nuclear pre-mRNA domain containing 2
Status Confidence Length 60006 bases Strand Minus strand
Position 3 : 90881632 - 90941637 RNA binding domain CREPT , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0062176 CREPT PF16566 4.6e-07 1
MGP_FVBNJ_P0062176 CID PF04818 2.3e-28 2
MGP_FVBNJ_P0062173 CID PF04818 4.8e-28 1
MGP_FVBNJ_P0062174 CID PF04818 4.9e-28 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rprd2-001 MGP_FVBNJ_T0062173 7697 1451aa MGP_FVBNJ_P0062173"/note="transcript_id=MGP_FVBNJ_T0062173
- MGP_FVBNJ_T0062174 7755 1469aa MGP_FVBNJ_P0062174"/note="transcript_id=MGP_FVBNJ_T0062174
- MGP_FVBNJ_T0062175 2167 No protein -
- MGP_FVBNJ_T0062176 3297 473aa MGP_FVBNJ_P0062176"/note="transcript_id=MGP_FVBNJ_T0062176
- MGP_FVBNJ_T0062177 589 No protein -
- MGP_FVBNJ_T0062178 1051 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P005861547.852827.3006mus_musculus_fvbnjMGP_FVBNJ_P006217410.61956.05854
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P004881549.679529.8077mus_musculus_fvbnjMGP_FVBNJ_P006217410.55146.33084

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P006217493.669293.0565mus_caroliMGP_CAROLIEiJ_P005923299.350298.7004
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0062482100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_ajMGP_AJ_P0062506100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_balbcjMGP_BALBcJ_P0062432100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0062930100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_dba2jMGP_DBA2J_P0062195100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_cbajMGP_CBAJ_P0062087100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_c3hhejMGP_C3HHeJ_P0062115100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_lpjMGP_LPJ_P0062336100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P006217499.455499.047mus_spretusMGP_SPRETEiJ_P006160997.987997.5855
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0063123100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculusENSMUSP00000088297100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P006217484.683584.5473mus_musculus_pwkphjMGP_PWKPhJ_P006195898.651998.4933
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P006217498.638597.4813mus_pahariMGP_PahariEiJ_P007020097.183196.0429
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P006217498.366297.9578mus_spicilegusENSMSIP0000000820797.437697.033
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P006217499.727799.5235mus_musculus_casteijMGP_CASTEiJ_P006241999.727799.5235
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0062169100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_wsbeijMGP_WSBEiJ_P0061390100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P0062174100100mus_musculus_akrjMGP_AKRJ_P0062441100100
MGP_FVBNJ_G0027385mus_musculus_fvbnjMGP_FVBNJ_P006217496.868695.0987rattus_norvegicusENSRNOP0000009250096.083794.3282

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression