RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0027385 | Gene ID |
|
Accession |
- |
Symbol |
Rprd2 |
Alias |
- |
Full Name |
regulation of nuclear pre-mRNA domain containing 2 |
Status |
Confidence |
Length |
60006 bases |
Strand |
Minus strand |
Position |
3 : 90881632 - 90941637 |
RNA binding domain |
CREPT , CID |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0062176 |
CREPT |
PF16566 |
4.6e-07 |
1 |
MGP_FVBNJ_P0062176 |
CID |
PF04818 |
2.3e-28 |
2 |
MGP_FVBNJ_P0062173 |
CID |
PF04818 |
4.8e-28 |
1 |
MGP_FVBNJ_P0062174 |
CID |
PF04818 |
4.9e-28 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rprd2-001 |
MGP_FVBNJ_T0062173 |
7697 |
1451aa |
MGP_FVBNJ_P0062173"/note="transcript_id=MGP_FVBNJ_T0062173 |
- |
MGP_FVBNJ_T0062174 |
7755 |
1469aa |
MGP_FVBNJ_P0062174"/note="transcript_id=MGP_FVBNJ_T0062174 |
- |
MGP_FVBNJ_T0062175 |
2167 |
No protein |
- |
- |
MGP_FVBNJ_T0062176 |
3297 |
473aa |
MGP_FVBNJ_P0062176"/note="transcript_id=MGP_FVBNJ_T0062176 |
- |
MGP_FVBNJ_T0062177 |
589 |
No protein |
- |
- |
MGP_FVBNJ_T0062178 |
1051 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0058615 | 47.8528 | 27.3006 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 10.6195 | 6.05854 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0048815 | 49.6795 | 29.8077 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 10.5514 | 6.33084 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 93.6692 | 93.0565 | mus_caroli | MGP_CAROLIEiJ_P0059232 | 99.3502 | 98.7004 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0062482 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0062506 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0062432 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0062930 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0062195 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0062087 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0062115 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0062336 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 99.4554 | 99.047 | mus_spretus | MGP_SPRETEiJ_P0061609 | 97.9879 | 97.5855 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0063123 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus | ENSMUSP00000088297 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 84.6835 | 84.5473 | mus_musculus_pwkphj | MGP_PWKPhJ_P0061958 | 98.6519 | 98.4933 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 98.6385 | 97.4813 | mus_pahari | MGP_PahariEiJ_P0070200 | 97.1831 | 96.0429 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 98.3662 | 97.9578 | mus_spicilegus | ENSMSIP00000008207 | 97.4376 | 97.033 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 99.7277 | 99.5235 | mus_musculus_casteij | MGP_CASTEiJ_P0062419 | 99.7277 | 99.5235 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0062169 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0061390 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0062441 | 100 | 100 |
MGP_FVBNJ_G0027385 | mus_musculus_fvbnj | MGP_FVBNJ_P0062174 | 96.8686 | 95.0987 | rattus_norvegicus | ENSRNOP00000092500 | 96.0837 | 94.3282 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |