Description

Ensembl ID MGP_FVBNJ_G0026942 Gene ID Accession -
Symbol Fxr1 Alias - Full Name fragile X mental retardation gene 1, autosomal homolog
Status Confidence Length 55951 bases Strand Plus strand
Position 3 : 30095883 - 30151833 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0060156 Agenet PF05641 9.6e-15 1
MGP_FVBNJ_P0060156 Agenet PF05641 9.6e-15 2
MGP_FVBNJ_P0060156 FXR_C1 PF16096 1.8e-38 3
MGP_FVBNJ_P0060156 KH_1 PF00013 1.2e-16 4
MGP_FVBNJ_P0060156 KH_1 PF00013 1.2e-16 5
MGP_FVBNJ_P0060156 KH_9 PF17904 1.5e-36 6
MGP_FVBNJ_P0060156 FXMRP1_C_core PF12235 5.6e-34 7
MGP_FVBNJ_P0060156 FXMRP1_C_core PF12235 5.6e-34 8
MGP_FVBNJ_P0060159 Agenet PF05641 9.7e-15 1
MGP_FVBNJ_P0060159 Agenet PF05641 9.7e-15 2
MGP_FVBNJ_P0060159 FXR_C1 PF16096 1.9e-38 3
MGP_FVBNJ_P0060159 KH_1 PF00013 1.2e-16 4
MGP_FVBNJ_P0060159 KH_1 PF00013 1.2e-16 5
MGP_FVBNJ_P0060159 KH_9 PF17904 1.5e-36 6
MGP_FVBNJ_P0060159 FXMRP1_C_core PF12235 1.5e-33 7
MGP_FVBNJ_P0060159 FXMRP1_C_core PF12235 1.5e-33 8
MGP_FVBNJ_P0060158 Agenet PF05641 1.1e-14 1
MGP_FVBNJ_P0060158 Agenet PF05641 1.1e-14 2
MGP_FVBNJ_P0060158 FXR_C1 PF16096 2e-38 3
MGP_FVBNJ_P0060158 KH_1 PF00013 1.4e-16 4
MGP_FVBNJ_P0060158 KH_1 PF00013 1.4e-16 5
MGP_FVBNJ_P0060158 KH_9 PF17904 1.6e-36 6
MGP_FVBNJ_P0060158 FXMRP1_C_core PF12235 4.8e-54 7
MGP_FVBNJ_P0060160 Agenet PF05641 1.5e-14 1
MGP_FVBNJ_P0060160 Agenet PF05641 1.5e-14 2
MGP_FVBNJ_P0060160 FXR_C1 PF16096 2e-38 3
MGP_FVBNJ_P0060160 KH_1 PF00013 1.8e-16 4
MGP_FVBNJ_P0060160 KH_1 PF00013 1.8e-16 5
MGP_FVBNJ_P0060160 KH_9 PF17904 1.5e-36 6
MGP_FVBNJ_P0060160 FXMRP1_C_core PF12235 9.2e-34 7
MGP_FVBNJ_P0060160 FXMRP1_C_core PF12235 9.2e-34 8
MGP_FVBNJ_P0060155 Agenet PF05641 1.9e-14 1
MGP_FVBNJ_P0060155 FXR_C1 PF16096 5.2e-38 2
MGP_FVBNJ_P0060155 KH_1 PF00013 2.3e-16 3
MGP_FVBNJ_P0060155 KH_1 PF00013 2.3e-16 4
MGP_FVBNJ_P0060155 KH_9 PF17904 1.9e-36 5
MGP_FVBNJ_P0060155 FXMRP1_C_core PF12235 6.2e-54 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Fxr1-001 MGP_FVBNJ_T0060155 2193 677aa MGP_FVBNJ_P0060155"/note="transcript_id=MGP_FVBNJ_T0060155
- MGP_FVBNJ_T0060156 1684 536aa MGP_FVBNJ_P0060156"/note="transcript_id=MGP_FVBNJ_T0060156
- MGP_FVBNJ_T0060157 1952 54aa MGP_FVBNJ_P0060157"/note="transcript_id=MGP_FVBNJ_T0060157
- MGP_FVBNJ_T0060158 1940 568aa MGP_FVBNJ_P0060158"/note="transcript_id=MGP_FVBNJ_T0060158
- MGP_FVBNJ_T0060159 2766 539aa MGP_FVBNJ_P0060159"/note="transcript_id=MGP_FVBNJ_T0060159
- MGP_FVBNJ_T0060160 1942 621aa MGP_FVBNJ_P0060160"/note="transcript_id=MGP_FVBNJ_T0060160
- MGP_FVBNJ_T0060161 651 No protein -
- MGP_FVBNJ_T0060162 646 132aa MGP_FVBNJ_P0060162"/note="transcript_id=MGP_FVBNJ_T0060162
- MGP_FVBNJ_T0060163 2488 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0026942

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0026942

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression