RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0026942 | Gene ID |
|
Accession |
- |
Symbol |
Fxr1 |
Alias |
- |
Full Name |
fragile X mental retardation gene 1, autosomal homolog |
Status |
Confidence |
Length |
55951 bases |
Strand |
Plus strand |
Position |
3 : 30095883 - 30151833 |
RNA binding domain |
Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0060156 |
Agenet |
PF05641 |
9.6e-15 |
1 |
MGP_FVBNJ_P0060156 |
Agenet |
PF05641 |
9.6e-15 |
2 |
MGP_FVBNJ_P0060156 |
FXR_C1 |
PF16096 |
1.8e-38 |
3 |
MGP_FVBNJ_P0060156 |
KH_1 |
PF00013 |
1.2e-16 |
4 |
MGP_FVBNJ_P0060156 |
KH_1 |
PF00013 |
1.2e-16 |
5 |
MGP_FVBNJ_P0060156 |
KH_9 |
PF17904 |
1.5e-36 |
6 |
MGP_FVBNJ_P0060156 |
FXMRP1_C_core |
PF12235 |
5.6e-34 |
7 |
MGP_FVBNJ_P0060156 |
FXMRP1_C_core |
PF12235 |
5.6e-34 |
8 |
MGP_FVBNJ_P0060159 |
Agenet |
PF05641 |
9.7e-15 |
1 |
MGP_FVBNJ_P0060159 |
Agenet |
PF05641 |
9.7e-15 |
2 |
MGP_FVBNJ_P0060159 |
FXR_C1 |
PF16096 |
1.9e-38 |
3 |
MGP_FVBNJ_P0060159 |
KH_1 |
PF00013 |
1.2e-16 |
4 |
MGP_FVBNJ_P0060159 |
KH_1 |
PF00013 |
1.2e-16 |
5 |
MGP_FVBNJ_P0060159 |
KH_9 |
PF17904 |
1.5e-36 |
6 |
MGP_FVBNJ_P0060159 |
FXMRP1_C_core |
PF12235 |
1.5e-33 |
7 |
MGP_FVBNJ_P0060159 |
FXMRP1_C_core |
PF12235 |
1.5e-33 |
8 |
MGP_FVBNJ_P0060158 |
Agenet |
PF05641 |
1.1e-14 |
1 |
MGP_FVBNJ_P0060158 |
Agenet |
PF05641 |
1.1e-14 |
2 |
MGP_FVBNJ_P0060158 |
FXR_C1 |
PF16096 |
2e-38 |
3 |
MGP_FVBNJ_P0060158 |
KH_1 |
PF00013 |
1.4e-16 |
4 |
MGP_FVBNJ_P0060158 |
KH_1 |
PF00013 |
1.4e-16 |
5 |
MGP_FVBNJ_P0060158 |
KH_9 |
PF17904 |
1.6e-36 |
6 |
MGP_FVBNJ_P0060158 |
FXMRP1_C_core |
PF12235 |
4.8e-54 |
7 |
MGP_FVBNJ_P0060160 |
Agenet |
PF05641 |
1.5e-14 |
1 |
MGP_FVBNJ_P0060160 |
Agenet |
PF05641 |
1.5e-14 |
2 |
MGP_FVBNJ_P0060160 |
FXR_C1 |
PF16096 |
2e-38 |
3 |
MGP_FVBNJ_P0060160 |
KH_1 |
PF00013 |
1.8e-16 |
4 |
MGP_FVBNJ_P0060160 |
KH_1 |
PF00013 |
1.8e-16 |
5 |
MGP_FVBNJ_P0060160 |
KH_9 |
PF17904 |
1.5e-36 |
6 |
MGP_FVBNJ_P0060160 |
FXMRP1_C_core |
PF12235 |
9.2e-34 |
7 |
MGP_FVBNJ_P0060160 |
FXMRP1_C_core |
PF12235 |
9.2e-34 |
8 |
MGP_FVBNJ_P0060155 |
Agenet |
PF05641 |
1.9e-14 |
1 |
MGP_FVBNJ_P0060155 |
FXR_C1 |
PF16096 |
5.2e-38 |
2 |
MGP_FVBNJ_P0060155 |
KH_1 |
PF00013 |
2.3e-16 |
3 |
MGP_FVBNJ_P0060155 |
KH_1 |
PF00013 |
2.3e-16 |
4 |
MGP_FVBNJ_P0060155 |
KH_9 |
PF17904 |
1.9e-36 |
5 |
MGP_FVBNJ_P0060155 |
FXMRP1_C_core |
PF12235 |
6.2e-54 |
6 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Fxr1-001 |
MGP_FVBNJ_T0060155 |
2193 |
677aa |
MGP_FVBNJ_P0060155"/note="transcript_id=MGP_FVBNJ_T0060155 |
- |
MGP_FVBNJ_T0060156 |
1684 |
536aa |
MGP_FVBNJ_P0060156"/note="transcript_id=MGP_FVBNJ_T0060156 |
- |
MGP_FVBNJ_T0060157 |
1952 |
54aa |
MGP_FVBNJ_P0060157"/note="transcript_id=MGP_FVBNJ_T0060157 |
- |
MGP_FVBNJ_T0060158 |
1940 |
568aa |
MGP_FVBNJ_P0060158"/note="transcript_id=MGP_FVBNJ_T0060158 |
- |
MGP_FVBNJ_T0060159 |
2766 |
539aa |
MGP_FVBNJ_P0060159"/note="transcript_id=MGP_FVBNJ_T0060159 |
- |
MGP_FVBNJ_T0060160 |
1942 |
621aa |
MGP_FVBNJ_P0060160"/note="transcript_id=MGP_FVBNJ_T0060160 |
- |
MGP_FVBNJ_T0060161 |
651 |
No protein |
- |
- |
MGP_FVBNJ_T0060162 |
646 |
132aa |
MGP_FVBNJ_P0060162"/note="transcript_id=MGP_FVBNJ_T0060162 |
- |
MGP_FVBNJ_T0060163 |
2488 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0026942 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0026942 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |