Description

Ensembl ID MGP_FVBNJ_G0025608 Gene ID Accession -
Symbol Fastkd1 Alias - Full Name FAST kinase domains 1
Status Confidence Length 26765 bases Strand Minus strand
Position 2 : 65997701 - 66024465 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0054852 RAP PF08373 1.8e-16 1
MGP_FVBNJ_P0054852 FAST_2 PF08368 3.5e-26 2
MGP_FVBNJ_P0054852 FAST_1 PF06743 2e-23 3
MGP_FVBNJ_P0054851 RAP PF08373 1.9e-16 1
MGP_FVBNJ_P0054851 FAST_2 PF08368 2.3e-26 2
MGP_FVBNJ_P0054851 FAST_1 PF06743 1.9e-23 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Fastkd1-001 MGP_FVBNJ_T0054851 2868 829aa MGP_FVBNJ_P0054851"/note="transcript_id=MGP_FVBNJ_T0054851
- MGP_FVBNJ_T0054852 2511 800aa MGP_FVBNJ_P0054852"/note="transcript_id=MGP_FVBNJ_T0054852
- MGP_FVBNJ_T0054853 2417 No protein -
- MGP_FVBNJ_T0054854 3203 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P002780642.539721.1111mus_musculus_fvbnjMGP_FVBNJ_P005485132.328116.0434
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P002006531.494913.4978mus_musculus_fvbnjMGP_FVBNJ_P005485126.176111.2183
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005739631.846315.3656mus_musculus_fvbnjMGP_FVBNJ_P005485131.001214.9578
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P003725235.249619.2133mus_musculus_fvbnjMGP_FVBNJ_P005485128.106215.3197
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P007009634.495418.5321mus_musculus_fvbnjMGP_FVBNJ_P005485122.677912.1834

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485197.708196.3812mus_caroliMGP_CAROLIEiJ_P005212497.708196.3812
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.638199.3969mus_musculus_129s1svimjMGP_129S1SvImJ_P005513999.638199.3969
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_ajMGP_AJ_P0055161100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_balbcjMGP_BALBcJ_P0055100100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.638199.3969mus_musculus_c57bl6njMGP_C57BL6NJ_P005558499.638199.3969
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_dba2jMGP_DBA2J_P0054887100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_cbajMGP_CBAJ_P0054785100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_c3hhejMGP_C3HHeJ_P0054831100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_lpjMGP_LPJ_P0054988100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.276298.6731mus_spretusMGP_SPRETEiJ_P005419899.276298.6731
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0055731100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.638199.3969mus_musculusENSMUSP0000007289699.638199.3969
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.638199.2762mus_musculus_pwkphjMGP_PWKPhJ_P005462799.638199.2762
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485197.346294.2099mus_pahariMGP_PahariEiJ_P006312297.346294.2099
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.396998.9144mus_spicilegusENSMSIP0000000578399.396998.9144
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.879499.6381mus_musculus_casteijMGP_CASTEiJ_P005502699.879499.6381
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0054833100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485199.879499.7587mus_musculus_wsbeijMGP_WSBEiJ_P005410499.879499.7587
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P0054851100100mus_musculus_akrjMGP_AKRJ_P0055119100100
MGP_FVBNJ_G0025608mus_musculus_fvbnjMGP_FVBNJ_P005485194.571888.7817rattus_norvegicusENSRNOP0000002903594.230888.4615

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression