RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0023901 | Gene ID |
|
Accession |
- |
Symbol |
Msh6 |
Alias |
- |
Full Name |
mutS homolog 6 |
Status |
Confidence |
Length |
15801 bases |
Strand |
Plus strand |
Position |
17 : 86396249 - 86412049 |
RNA binding domain |
MutS_II |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0048461 |
MutS_II |
PF05188 |
2e-09 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Msh6-201 |
MGP_FVBNJ_T0048461 |
4254 |
1358aa |
MGP_FVBNJ_P0048461"/note="transcript_id=MGP_FVBNJ_T0048461 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0064074 | 37.8914 | 21.7119 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 26.7305 | 15.3166 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 42.4599 | 25.6684 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 29.2342 | 17.673 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0046976 | 40.8163 | 24.2497 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 25.0368 | 14.8748 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 99.2636 | 98.1591 | mus_caroli | MGP_CAROLIEiJ_P0045825 | 99.1176 | 98.0147 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0048780 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0048759 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0048720 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0049212 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0048492 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0048390 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0048464 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0048609 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 92.4153 | 92.1208 | mus_spretus | MGP_SPRETEiJ_P0047750 | 97.3623 | 97.052 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0049312 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus | ENSMUSP00000005503 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0048144 | 96.3804 | 96.3804 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 98.2327 | 95.8027 | mus_pahari | MGP_PahariEiJ_P0045337 | 98.1604 | 95.7322 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 99.19 | 99.1163 | mus_spicilegus | ENSMSIP00000029429 | 99.3363 | 99.2625 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 99.9264 | 99.9264 | mus_musculus_casteij | MGP_CASTEiJ_P0048545 | 99.9264 | 99.9264 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048465 | 100 | 100 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 98.8218 | 98.8218 | mus_musculus_wsbeij | MGP_WSBEiJ_P0047767 | 98.8218 | 98.8218 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 99.9264 | 99.8527 | mus_musculus_akrj | MGP_AKRJ_P0048719 | 99.9264 | 99.8527 |
MGP_FVBNJ_G0023901 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 95.8763 | 92.1208 | rattus_norvegicus | ENSRNOP00000076177 | 95.665 | 91.9177 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |