Description

Ensembl ID MGP_FVBNJ_G0023901 Gene ID Accession -
Symbol Msh6 Alias - Full Name mutS homolog 6
Status Confidence Length 15801 bases Strand Plus strand
Position 17 : 86396249 - 86412049 RNA binding domain MutS_II
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0048461 MutS_II PF05188 2e-09 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Msh6-201 MGP_FVBNJ_T0048461 4254 1358aa MGP_FVBNJ_P0048461"/note="transcript_id=MGP_FVBNJ_T0048461

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P006407437.891421.7119mus_musculus_fvbnjMGP_FVBNJ_P004846126.730515.3166
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004845342.459925.6684mus_musculus_fvbnjMGP_FVBNJ_P004846129.234217.673
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004697640.816324.2497mus_musculus_fvbnjMGP_FVBNJ_P004846125.036814.8748

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846199.263698.1591mus_caroliMGP_CAROLIEiJ_P004582599.117698.0147
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0048780100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_ajMGP_AJ_P0048759100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_balbcjMGP_BALBcJ_P0048720100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0049212100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_dba2jMGP_DBA2J_P0048492100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_cbajMGP_CBAJ_P0048390100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_c3hhejMGP_C3HHeJ_P0048464100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_lpjMGP_LPJ_P0048609100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846192.415392.1208mus_spretusMGP_SPRETEiJ_P004775097.362397.052
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0049312100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculusENSMUSP00000005503100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_pwkphjMGP_PWKPhJ_P004814496.380496.3804
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846198.232795.8027mus_pahariMGP_PahariEiJ_P004533798.160495.7322
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846199.1999.1163mus_spicilegusENSMSIP0000002942999.336399.2625
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846199.926499.9264mus_musculus_casteijMGP_CASTEiJ_P004854599.926499.9264
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P0048461100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0048465100100
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846198.821898.8218mus_musculus_wsbeijMGP_WSBEiJ_P004776798.821898.8218
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846199.926499.8527mus_musculus_akrjMGP_AKRJ_P004871999.926499.8527
MGP_FVBNJ_G0023901mus_musculus_fvbnjMGP_FVBNJ_P004846195.876392.1208rattus_norvegicusENSRNOP0000007617795.66591.9177

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression