| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_FVBNJ_G0023898 | Gene ID |
|
Accession |
- |
| Symbol |
Msh2 |
Alias |
- |
Full Name |
mutS homolog 2 |
| Status |
Confidence |
Length |
50047 bases |
Strand |
Plus strand |
| Position |
17 : 86096014 - 86146060 |
RNA binding domain |
MutS_II |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_FVBNJ_P0048453 |
MutS_II |
PF05188 |
1.1e-21 |
1 |
| MGP_FVBNJ_P0048456 |
MutS_II |
PF05188 |
3.8e-06 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Msh2-001 |
MGP_FVBNJ_T0048453 |
3283 |
935aa |
MGP_FVBNJ_P0048453"/note="transcript_id=MGP_FVBNJ_T0048453 |
| - |
MGP_FVBNJ_T0048454 |
1752 |
No protein |
- |
| - |
MGP_FVBNJ_T0048455 |
2502 |
No protein |
- |
| - |
MGP_FVBNJ_T0048456 |
630 |
209aa |
MGP_FVBNJ_P0048456"/note="transcript_id=MGP_FVBNJ_T0048456 |
| - |
MGP_FVBNJ_T0048457 |
409 |
No protein |
- |
| - |
MGP_FVBNJ_T0048458 |
510 |
67aa |
MGP_FVBNJ_P0048458"/note="transcript_id=MGP_FVBNJ_T0048458 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0064074 | 38.7265 | 21.19 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 39.6791 | 21.7112 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048461 | 29.2342 | 17.673 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 42.4599 | 25.6684 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0046976 | 37.9352 | 21.4886 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 33.7968 | 19.1444 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 99.5722 | 98.6096 | mus_caroli | MGP_CAROLIEiJ_P0045818 | 99.4658 | 98.5043 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0048773 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 99.8931 | mus_musculus_aj | MGP_AJ_P0048751 | 100 | 99.8931 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 99.8931 | mus_musculus_balbcj | MGP_BALBcJ_P0048712 | 100 | 99.8931 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0049204 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0048484 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 99.8931 | mus_musculus_cbaj | MGP_CBAJ_P0048383 | 100 | 99.8931 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 99.8931 | mus_musculus_c3hhej | MGP_C3HHeJ_P0048456 | 100 | 99.8931 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0048601 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 99.8931 | 99.7861 | mus_spretus | MGP_SPRETEiJ_P0047742 | 99.8931 | 99.7861 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0049304 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus | ENSMUSP00000024967 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 99.8931 | mus_musculus_pwkphj | MGP_PWKPhJ_P0048136 | 100 | 99.8931 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 98.8235 | 97.6471 | mus_pahari | MGP_PahariEiJ_P0045330 | 99.0354 | 97.8564 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 92.7273 | 92.2995 | mus_spicilegus | ENSMSIP00000011501 | 100 | 99.5386 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 99.4652 | mus_musculus_casteij | MGP_CASTEiJ_P0048538 | 100 | 99.4652 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0048456 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0047759 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0048711 | 100 | 100 |
| MGP_FVBNJ_G0023898 | mus_musculus_fvbnj | MGP_FVBNJ_P0048453 | 97.9679 | 94.9733 | rattus_norvegicus | ENSRNOP00000021538 | 98.1779 | 95.1768 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |