Description

Ensembl ID MGP_FVBNJ_G0023876 Gene ID Accession -
Symbol Lrpprc Alias - Full Name leucine-rich PPR-motif containing
Status Confidence Length 88341 bases Strand Minus strand
Position 17 : 83060340 - 83148680 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0048391 PPR_3 PF13812 1.3e-24 1
MGP_FVBNJ_P0048391 PPR_3 PF13812 1.3e-24 2
MGP_FVBNJ_P0048391 PPR_long PF17177 5.3e-16 3
MGP_FVBNJ_P0048391 PPR PF01535 6.6e-23 4
MGP_FVBNJ_P0048391 PPR PF01535 6.6e-23 5
MGP_FVBNJ_P0048391 PPR PF01535 6.6e-23 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Lrpprc-001 MGP_FVBNJ_T0048391 4393 1392aa MGP_FVBNJ_P0048391"/note="transcript_id=MGP_FVBNJ_T0048391
- MGP_FVBNJ_T0048392 809 No protein -
- MGP_FVBNJ_T0048393 565 141aa MGP_FVBNJ_P0048393"/note="transcript_id=MGP_FVBNJ_T0048393
- MGP_FVBNJ_T0048394 513 No protein -
- MGP_FVBNJ_T0048395 2823 No protein -
- MGP_FVBNJ_T0048396 4010 No protein -
- MGP_FVBNJ_T0048397 967 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0023876

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839197.916795.6178mus_caroliMGP_CAROLIEiJ_P004575597.916795.6178
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_129s1svimjMGP_129S1SvImJ_P004871199.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_ajMGP_AJ_P004869099.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_balbcjMGP_BALBcJ_P004865199.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_c57bl6njMGP_C57BL6NJ_P004914499.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_dba2jMGP_DBA2J_P004842699.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_cbajMGP_CBAJ_P004832499.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_c3hhejMGP_C3HHeJ_P004839899.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_lpjMGP_LPJ_P004853999.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.353498.5632mus_spretusMGP_SPRETEiJ_P004767699.353498.5632
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839110099.9282mus_musculus_nzohlltjMGP_NZOHlLtJ_P004924110099.9282
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculusENSMUSP0000010792799.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.784599.7126mus_musculus_pwkphjMGP_PWKPhJ_P004807099.784599.7126
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839196.551793.4626mus_pahariMGP_PahariEiJ_P004526996.551793.4626
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839198.850698.204mus_spicilegusENSMSIP0000001302399.135498.487
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.712699.569mus_musculus_casteijMGP_CASTEiJ_P004847399.712699.569
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P0048391100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0048394100100
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_wsbeijMGP_WSBEiJ_P004769899.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839199.856399.7845mus_musculus_akrjMGP_AKRJ_P004865299.856399.7845
MGP_FVBNJ_G0023876mus_musculus_fvbnjMGP_FVBNJ_P004839195.186890.3736rattus_norvegicusENSRNOP0000000820094.778389.9857

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression