Description

Ensembl ID MGP_FVBNJ_G0022007 Gene ID Accession -
Symbol Trmu Alias - Full Name tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Status Confidence Length 17998 bases Strand Plus strand
Position 15 : 82089978 - 82107975 RNA binding domain tRNA_Me_trans
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_FVBNJ_P0041838 tRNA_Me_trans PF03054 1.1e-84 1
MGP_FVBNJ_P0041837 tRNA_Me_trans PF03054 1.5e-29 1
MGP_FVBNJ_P0041839 tRNA_Me_trans PF03054 1.7e-24 1
MGP_FVBNJ_P0041839 tRNA_Me_trans PF03054 1.7e-24 2
MGP_FVBNJ_P0041841 tRNA_Me_trans PF03054 2.5e-05 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Trmu-001 MGP_FVBNJ_T0041837 468 99aa MGP_FVBNJ_P0041837"/note="transcript_id=MGP_FVBNJ_T0041837
- MGP_FVBNJ_T0041838 1526 417aa MGP_FVBNJ_P0041838"/note="transcript_id=MGP_FVBNJ_T0041838
- MGP_FVBNJ_T0041839 314 103aa MGP_FVBNJ_P0041839"/note="transcript_id=MGP_FVBNJ_T0041839
- MGP_FVBNJ_T0041840 743 No protein -
- MGP_FVBNJ_T0041841 665 57aa MGP_FVBNJ_P0041841"/note="transcript_id=MGP_FVBNJ_T0041841
- MGP_FVBNJ_T0041842 809 No protein -
- MGP_FVBNJ_T0041843 774 No protein -
- MGP_FVBNJ_T0041844 869 No protein -
- MGP_FVBNJ_T0041845 2048 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0022007

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P004183899.520499.0408mus_caroliMGP_CAROLIEiJ_P003935399.520499.0408
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0042114100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_ajMGP_AJ_P0042074100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_balbcjMGP_BALBcJ_P0042069100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0042552100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_dba2jMGP_DBA2J_P0041864100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_cbajMGP_CBAJ_P0041711100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_c3hhejMGP_C3HHeJ_P0041804100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_lpjMGP_LPJ_P0041934100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_spretusMGP_SPRETEiJ_P0041160100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0042591100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculusENSMUSP00000023019100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_pwkphjMGP_PWKPhJ_P0041464100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P004183899.760299.2806mus_pahariMGP_PahariEiJ_P004270499.760299.2806
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_spicilegusENSMSIP00000022714100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_casteijMGP_CASTEiJ_P0041878100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0041804100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_wsbeijMGP_WSBEiJ_P0041191100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P0041838100100mus_musculus_akrjMGP_AKRJ_P0042040100100
MGP_FVBNJ_G0022007mus_musculus_fvbnjMGP_FVBNJ_P004183899.040897.6019rattus_norvegicusENSRNOP0000006125493.650892.2903

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression