RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_FVBNJ_G0022007 | Gene ID |
|
Accession |
- |
Symbol |
Trmu |
Alias |
- |
Full Name |
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase |
Status |
Confidence |
Length |
17998 bases |
Strand |
Plus strand |
Position |
15 : 82089978 - 82107975 |
RNA binding domain |
tRNA_Me_trans |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_FVBNJ_P0041838 |
tRNA_Me_trans |
PF03054 |
1.1e-84 |
1 |
MGP_FVBNJ_P0041837 |
tRNA_Me_trans |
PF03054 |
1.5e-29 |
1 |
MGP_FVBNJ_P0041839 |
tRNA_Me_trans |
PF03054 |
1.7e-24 |
1 |
MGP_FVBNJ_P0041839 |
tRNA_Me_trans |
PF03054 |
1.7e-24 |
2 |
MGP_FVBNJ_P0041841 |
tRNA_Me_trans |
PF03054 |
2.5e-05 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Trmu-001 |
MGP_FVBNJ_T0041837 |
468 |
99aa |
MGP_FVBNJ_P0041837"/note="transcript_id=MGP_FVBNJ_T0041837 |
- |
MGP_FVBNJ_T0041838 |
1526 |
417aa |
MGP_FVBNJ_P0041838"/note="transcript_id=MGP_FVBNJ_T0041838 |
- |
MGP_FVBNJ_T0041839 |
314 |
103aa |
MGP_FVBNJ_P0041839"/note="transcript_id=MGP_FVBNJ_T0041839 |
- |
MGP_FVBNJ_T0041840 |
743 |
No protein |
- |
- |
MGP_FVBNJ_T0041841 |
665 |
57aa |
MGP_FVBNJ_P0041841"/note="transcript_id=MGP_FVBNJ_T0041841 |
- |
MGP_FVBNJ_T0041842 |
809 |
No protein |
- |
- |
MGP_FVBNJ_T0041843 |
774 |
No protein |
- |
- |
MGP_FVBNJ_T0041844 |
869 |
No protein |
- |
- |
MGP_FVBNJ_T0041845 |
2048 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0022007 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 99.5204 | 99.0408 | mus_caroli | MGP_CAROLIEiJ_P0039353 | 99.5204 | 99.0408 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0042114 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0042074 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0042069 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042552 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0041864 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0041711 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0041804 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0041934 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0041160 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0042591 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus | ENSMUSP00000023019 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0041464 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 99.7602 | 99.2806 | mus_pahari | MGP_PahariEiJ_P0042704 | 99.7602 | 99.2806 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_spicilegus | ENSMSIP00000022714 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0041878 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0041804 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0041191 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0042040 | 100 | 100 |
MGP_FVBNJ_G0022007 | mus_musculus_fvbnj | MGP_FVBNJ_P0041838 | 99.0408 | 97.6019 | rattus_norvegicus | ENSRNOP00000061254 | 93.6508 | 92.2903 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |